RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 CEACAM3P40198 252 aa11.07□□□□□ -0.64
DFFB-209ENST00000477548 CAMPP49913 170 aa11.07□□□□□ -0.64
DFFB-209ENST00000477548 SAP25Q8TEE9 199 aa11.07□□□□□ -0.64
DFFB-209ENST00000477548 FAM222BQ8WU58 562 aa11.07□□□□□ -0.64
DFFB-209ENST00000477548 ABHD17AQ96GS6 310 aa11.07□□□□□ -0.64
DFFB-209ENST00000477548 ZNF355PQ9NSJ1 428 aa11.07□□□□□ -0.64
DFFB-209ENST00000477548 GGTLC3B5MD39 225 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 MT-CO3P00414 261 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 PPOXP50336 477 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 KLF5Q13887 457 aaPredicted RBP11.06□□□□□ -0.64
DFFB-209ENST00000477548 TUSC5Q8IXB3 177 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 PLPPR2Q96GM1 343 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 CITED1Q99966 193 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 COMMD5Q9GZQ3 224 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 URB1O60287 2271 aaKnown RBP11.06□□□□□ -0.64
DFFB-209ENST00000477548 A0A1B0GV72 72 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 SH2D7A6NKC9 451 aaPredicted RBP11.06□□□□□ -0.64
DFFB-209ENST00000477548 CRYGCP07315 174 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 FOXF2Q12947 444 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 GDF5OSQ5U4N7 250 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 FAM71F2Q6NXP2 309 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 RASL11AQ6T310 242 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 TPRX1Q8N7U7 411 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 WIPF2Q8TF74 440 aaPredicted RBP11.06□□□□□ -0.64
DFFB-209ENST00000477548 LINC00470Q9BZP3 86 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 SLC25A10Q9UBX3 287 aaPredicted RBP11.06□□□□□ -0.64
DFFB-209ENST00000477548 TECTAO75443 2155 aa11.06□□□□□ -0.64
DFFB-209ENST00000477548 TRAV3A0A0B4J244 114 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 BRI3O95415 125 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 GPR12P47775 334 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 TRAV8-6A0A0B4J262 113 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 PRR31Q5SQ13 230 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 TMEM164Q5U3C3 297 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 ZNF841Q6ZN19 808 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 FAM214BQ7L5A3 538 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 OR2V2Q96R30 315 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
DFFB-209ENST00000477548 TCF19Q9Y242 345 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 KNTC1P50748 2209 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 CORTO00230 105 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 CD5LO43866 347 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 SAP30O75446 220 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 NUP35Q8NFH5 326 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 OR52E5Q8NH55 327 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 IGF2BP2-AS1Q96M15 143 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 NABP2Q9BQ15 211 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 WDR54Q9H977 334 aa11.05□□□□□ -0.64
DFFB-209ENST00000477548 DMXL1Q9Y485 3027 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 GNG7O60262 68 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 TFF1P04155 84 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 PRR20EP86478 221 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 PRR20CP86479 221 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 PRR20DP86480 221 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 PRR20BP86481 221 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 PRR20AP86496 221 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 SLC35E4Q6ICL7 350 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 TMEM191AQ9H0A3 160 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 A0A087X0K7 114 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 SYS1-DBNDD2H3BUS1 97 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 DUTP33316 252 aaKnown RBP11.04□□□□□ -0.64
DFFB-209ENST00000477548 ZC2HC1AQ96GY0 325 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 ENY2Q9NPA8 101 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 PILRBQ9UKJ0 227 aa11.04□□□□□ -0.64
DFFB-209ENST00000477548 FAM90A9PA6NNJ1 464 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 J3QR06 171 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 PLGLB1Q02325 96 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 PMS2CLQ68D20 193 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 SARAFQ96BY9 339 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 COQ2Q96H96 371 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 SMPXQ9UHP9 88 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 DUSP13Q9UII6 198 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 BOD1L1Q8NFC6 3051 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 H0Y8G0 127 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 WNT9BO14905 357 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 CCL4P13236 92 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 ARF6P62330 175 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 HOXA4Q00056 320 aaPredicted RBP11.03□□□□□ -0.64
DFFB-209ENST00000477548 SAMD13Q5VXD3 122 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 TRAT1Q6PIZ9 186 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 LINC00173Q6ZV60 143 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 CXorf67Q86X51 503 aaPredicted RBP11.03□□□□□ -0.64
DFFB-209ENST00000477548 Q8TCH9 128 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 LINC00479Q96M42 142 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 TMEM140Q9NV12 185 aa11.03□□□□□ -0.64
DFFB-209ENST00000477548 IGKV3D-15A0A087WSY6 115 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 TMEM265A0A087WTH1 108 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 LEPROTL1O95214 131 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 LGALS7P47929 136 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 TAS2R45P59539 299 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 HERV-K104P63124 156 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 GABRA6Q16445 453 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 OR13A1Q8NGR1 328 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 ZNF503Q96F45 646 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 GRAMD2BQ96HH9 432 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 ATP6V0BQ99437 205 aa11.02□□□□□ -0.64
DFFB-209ENST00000477548 NCKAP5O14513 1909 aa11.02□□□□□ -0.65
DFFB-209ENST00000477548 C21orf140B9A014 251 aa11.02□□□□□ -0.65
DFFB-209ENST00000477548 FOXA3P55318 350 aaPredicted RBP11.02□□□□□ -0.65
DFFB-209ENST00000477548 FAM162BQ5T6X4 162 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms