RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 HIST1H1BP16401 226 aaKnown RBP3.65□□□□□ -1.83
RGPD5-209ENST00000477523 ZNF562Q6V9R5 426 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 OR4F5Q8NH21 305 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 LINC00052Q96N35 136 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 OR4F4Q96R69 305 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 IGHV3-48P01763 117 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 ORM2P19652 201 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 HNF1AP20823 631 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 LYZP61626 148 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 C10orf113Q5VZT2 155 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 SPNS3Q6ZMD2 512 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 SLC35E3Q7Z769 313 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 ZNF295-AS1Q8N0V1 137 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 Q96MF0 132 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 SLC35B3Q9H1N7 401 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 GAR1Q9NY12 217 aaKnown RBP3.65□□□□□ -1.83
RGPD5-209ENST00000477523 F11RQ9Y624 299 aaKnown RBP3.65□□□□□ -1.83
RGPD5-209ENST00000477523 CENPVL3A0A0U1RRI6 287 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 FCN1O00602 326 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 HYPMO75409 117 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 IGLV2-23P01705 113 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 UBE2L3P68036 154 aaKnown RBP3.65□□□□□ -1.83
RGPD5-209ENST00000477523 RBM14Q96PK6 669 aaKnown RBP3.65□□□□□ -1.83
RGPD5-209ENST00000477523 SSX3Q99909 188 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 SMDT1Q9H4I9 107 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 RPL29P47914 159 aaKnown RBP3.64□□□□□ -1.83
RGPD5-209ENST00000477523 PQLC2Q6ZP29 291 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 OR2T6Q8NHC8 308 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 C19orf24Q9BVV8 132 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 KIAA2026Q5HYC2 2103 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 FRYQ5TBA9 3013 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 MFAP4P55083 255 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 KHDC3LQ587J8 217 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 EIF4E3Q8N5X7 224 aaKnown RBP3.64□□□□□ -1.83
RGPD5-209ENST00000477523 STXBP6Q8NFX7 210 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 VSIRQ9H7M9 311 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 GNB4Q9HAV0 340 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 TMEM167BQ9NRX6 74 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 CHD6Q8TD26 2715 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 TRAV30A0A087WSZ9 112 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 A0A0U1RQK1 487 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 ZNF727A8MUV8 499 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 OR2J3O76001 311 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 SCGB2A2Q13296 93 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 TMEM249Q2WGJ8 235 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 Q8WTZ3 238 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 RPUSD4Q96CM3 377 aaKnown RBP3.64□□□□□ -1.83
RGPD5-209ENST00000477523 SMIM7Q9BQ49 75 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 SRSF8Q9BRL6 282 aaKnown RBP3.64□□□□□ -1.83
RGPD5-209ENST00000477523 GGTLC1Q9BX51 225 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 MANBALQ9NQG1 85 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 C21orf62Q9NYP8 219 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 RFNGQ9Y644 331 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 FREM2Q5SZK8 3169 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 EIF3GO75821 320 aaKnown RBP eCLIP3.64□□□□□ -1.83
RGPD5-209ENST00000477523 CXorf1O96002 111 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 PAX8Q06710 450 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 LOXL1Q08397 574 aaPredicted RBP3.64□□□□□ -1.83
RGPD5-209ENST00000477523 GAMTQ14353 236 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 CYB5R2Q6BCY4 276 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 TMEM219Q86XT9 240 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 FBXL7Q9UJT9 491 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 FUT9Q9Y231 359 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 FNDC10F2Z333 226 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 F6UZH7 168 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 NUPL2O15504 423 aaKnown RBP3.64□□□□□ -1.83
RGPD5-209ENST00000477523 PAGE4O60829 102 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 KRTAP10-9P60411 292 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 CYP2G1PQ6ZSU1 146 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 RPP25LQ8N5L8 163 aaKnown RBP3.64□□□□□ -1.83
RGPD5-209ENST00000477523 OR1B1Q8NGR6 318 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 SUN5Q8TC36 379 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 TXNDC17Q9BRA2 123 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 RPS10P5Q9NQ39 176 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 VAX2Q9UIW0 290 aa3.64□□□□□ -1.83
RGPD5-209ENST00000477523 ARHGAP21Q5T5U3 1957 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 INS-IGF2F8WCM5 200 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 LY6LH3BQJ8 138 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 GATA2P23769 480 aaPredicted RBP3.63□□□□□ -1.83
RGPD5-209ENST00000477523 MEF2BQ02080 365 aaPredicted RBP3.63□□□□□ -1.83
RGPD5-209ENST00000477523 MBD3L1Q8WWY6 194 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 TMEM68Q96MH6 324 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 DNAJC4Q9NNZ3 241 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 RNF24Q9Y225 148 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 PRELID1Q9Y255 219 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.63□□□□□ -1.83
RGPD5-209ENST00000477523 IGLC7A0M8Q6 106 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 VWC2LB2RUY7 222 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 HLA-DRB1P01911 266 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 RD3LP0DJH9 198 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 ZNF506Q5JVG8 444 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 OR5AU1Q8NGC0 362 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 OR5R1Q8NH85 324 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 CFHR4Q92496 578 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 YAE1D1Q9NRH1 226 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 HIGD1AQ9Y241 93 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 DNAH14Q0VDD8 3507 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 C11orf94C9JXX5 98 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 AP4M1O00189 453 aa3.63□□□□□ -1.83
RGPD5-209ENST00000477523 TSPAN4O14817 238 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms