RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 LINC00482Q8N8I6 264 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 OR1P1Q8NH06 330 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 CHAC2Q8WUX2 184 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 MGAT4CQ9UBM8 478 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 S4R3C0 116 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 IGHV4OR15-8A0A075B7B6 117 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 A0A087WW49 117 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 ANKRD34BA5PLL1 514 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 C15orf62A8K5M9 175 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 CEBPZOSA8MTT3 80 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 H0YIZ8 118 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 K7EIM0 57 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 K7EPK0 472 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 IAPPP10997 89 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
CCNL1-217ENST00000476367 HOXA1P49639 335 aaPredicted RBP11.1□□□□□ -0.63
CCNL1-217ENST00000476367 RUNX1Q01196 453 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 ZNF616Q08AN1 781 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 NECAP1Q8NC96 275 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 OR1N2Q8NGR9 330 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 DPF1Q92782 380 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 FBXL7Q9UJT9 491 aa11.1□□□□□ -0.63
CCNL1-217ENST00000476367 A0A1B0GVG6 124 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 F8W735 103 aaPredicted RBP11.09□□□□□ -0.63
CCNL1-217ENST00000476367 ATP5G2Q06055 141 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 RAB32Q13637 225 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 FHL3Q13643 280 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 MLANAQ16655 118 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 ZNF414Q96IQ9 312 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 OR4C12Q96R67 309 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 NMES1Q9C002 83 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 FNDC4Q9H6D8 234 aaPredicted RBP11.09□□□□□ -0.63
CCNL1-217ENST00000476367 MRPL36Q9P0J6 103 aaKnown RBP11.09□□□□□ -0.63
CCNL1-217ENST00000476367 NOTCH3Q9UM47 2321 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 NOTCH1P46531 2555 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 I3L2K1 104 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 WRBO00258 174 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 IGHV3-23P01764 117 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 SLURP1P55000 103 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 ERHP84090 104 aaKnown RBP11.09□□□□□ -0.63
CCNL1-217ENST00000476367 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 CCDC140Q96MF4 163 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 MED28Q9H204 178 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 HEYLQ9NQ87 328 aaPredicted RBP11.09□□□□□ -0.63
CCNL1-217ENST00000476367 CACFD1Q9UGQ2 172 aa11.09□□□□□ -0.63
CCNL1-217ENST00000476367 PMS2P5A8MQ11 134 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 PRSS46E5RG02 174 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 LINC01619G3V211 115 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 G3V3Q6 166 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 SSSCA1O60232 199 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 SCGB1D2O95969 90 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 OR8U8P0C7N1 319 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 HIST1H1BP16401 226 aaKnown RBP11.08□□□□□ -0.64
CCNL1-217ENST00000476367 Q5BKY6 102 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 SLC25A24Q6NUK1 477 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 C1QL4Q86Z23 238 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 SLC24A4Q8NFF2 622 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 RNF126Q9BV68 326 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 ENY2Q9NPA8 101 aa11.08□□□□□ -0.64
CCNL1-217ENST00000476367 IGHV3-21A0A0B4J1V1 117 aa11.07□□□□□ -0.64
CCNL1-217ENST00000476367 H3BP45 60 aa11.07□□□□□ -0.64
CCNL1-217ENST00000476367 CYB5BO43169 146 aa11.07□□□□□ -0.64
CCNL1-217ENST00000476367 IGHV3-48P01763 117 aa11.07□□□□□ -0.64
CCNL1-217ENST00000476367 HSPB1P04792 205 aaKnown RBP11.07□□□□□ -0.64
CCNL1-217ENST00000476367 IGLL1P15814 213 aa11.07□□□□□ -0.64
CCNL1-217ENST00000476367 HTR2BP41595 481 aa11.07□□□□□ -0.64
CCNL1-217ENST00000476367 SCARB1Q8WTV0 552 aa11.07□□□□□ -0.64
CCNL1-217ENST00000476367 PPP1R1CQ8WVI7 109 aa11.07□□□□□ -0.64
CCNL1-217ENST00000476367 CCNKO75909 580 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 NPY1RP25929 384 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 SNCAP37840 140 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 OXLD1Q5BKU9 147 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 HAPLN4Q86UW8 402 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 MISP3Q96FF7 219 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 SMIM8Q96KF7 97 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 HIPK2Q9H2X6 1198 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
CCNL1-217ENST00000476367 OR5AC2Q9NZP5 309 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 THYN1Q9P016 225 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 PEF1Q9UBV8 284 aaKnown RBP11.06□□□□□ -0.64
CCNL1-217ENST00000476367 U3KQ87 197 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 TRAV14DV4A0A0A6YYC5 116 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 G3V4G9 280 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 MED6O75586 246 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 DEDDO75618 318 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 HOXD3P31249 432 aaPredicted RBP11.06□□□□□ -0.64
CCNL1-217ENST00000476367 WFDC9Q8NEX5 89 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 ZNF502Q8TBZ5 544 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 DCUN1D4Q92564 292 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 EEF1AKMT3Q96AZ1 226 aa11.06□□□□□ -0.64
CCNL1-217ENST00000476367 ZNF436Q9C0F3 470 aaPredicted RBP11.06□□□□□ -0.64
CCNL1-217ENST00000476367 LSM5Q9Y4Y9 91 aaKnown RBP11.06□□□□□ -0.64
CCNL1-217ENST00000476367 PPP5D1E7EU14 171 aa11.05□□□□□ -0.64
CCNL1-217ENST00000476367 MPC2O95563 127 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms