RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 NAT8Q9UHE5 227 aa13.03□□□□□ -0.32
VARS2-207ENST00000476162 PRNDQ9UKY0 176 aa13.03□□□□□ -0.32
VARS2-207ENST00000476162 J3QR06 171 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 UPK2O00526 184 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 NUPR1O60356 82 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 TYMSP04818 313 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 ADIRFQ15847 76 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 TPTE2P1Q5T6R2 138 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 MIC13Q5XKP0 118 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 TMEM256Q8N2U0 113 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 OR5B12Q96R08 314 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 MRPL20Q9BYC9 149 aaKnown RBP13.02□□□□□ -0.33
VARS2-207ENST00000476162 NPVFQ9HCQ7 196 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 PXMP4Q9Y6I8 212 aa13.02□□□□□ -0.33
VARS2-207ENST00000476162 A0A1W2PPV4 95 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 TMEM250H0YL14 139 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 LRRC10Q5BKY1 277 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 TOMM20LQ6UXN7 152 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 LSM4Q9Y4Z0 139 aaKnown RBP13.01□□□□□ -0.33
VARS2-207ENST00000476162 TNCP24821 2201 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.01□□□□□ -0.33
VARS2-207ENST00000476162 H7BYZ3 331 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 KBTBD11O94819 623 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 REG1BP48304 166 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 TMEM183BQ1AE95 376 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 CLEC12BQ2HXU8 276 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 SSMEM1Q8WWF3 244 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 PARLQ9H300 379 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 ZNF257Q9Y2Q1 563 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 SPTA1P02549 2419 aa13.01□□□□□ -0.33
VARS2-207ENST00000476162 SAA1P0DJI8 122 aaPredicted RBP13□□□□□ -0.33
VARS2-207ENST00000476162 APOBEC3AP31941 199 aaPredicted RBP13□□□□□ -0.33
VARS2-207ENST00000476162 BSXQ3C1V8 233 aa13□□□□□ -0.33
VARS2-207ENST00000476162 CYP2G1PQ6ZSU1 146 aa13□□□□□ -0.33
VARS2-207ENST00000476162 RAB1CQ92928 201 aa13□□□□□ -0.33
VARS2-207ENST00000476162 PLEKHA3Q9HB20 300 aa13□□□□□ -0.33
VARS2-207ENST00000476162 PAM16Q9Y3D7 125 aa13□□□□□ -0.33
VARS2-207ENST00000476162 PLAUP00749 431 aa13□□□□□ -0.33
VARS2-207ENST00000476162 PPBPP02775 128 aa13□□□□□ -0.33
VARS2-207ENST00000476162 PRCDQ00LT1 54 aa13□□□□□ -0.33
VARS2-207ENST00000476162 STPG4Q8N801 248 aa13□□□□□ -0.33
VARS2-207ENST00000476162 OR1L6Q8NGR2 347 aa13□□□□□ -0.33
VARS2-207ENST00000476162 OR2T10Q8NGZ9 312 aa13□□□□□ -0.33
VARS2-207ENST00000476162 LINC01560Q8TB33 94 aa13□□□□□ -0.33
VARS2-207ENST00000476162 LOC105371242A0A075B767 164 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 TEX50A0A1B0GTY4 177 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 C11orf94C9JXX5 98 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 H0YJW9 148 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 CD3EP07766 207 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 CD33P20138 364 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 LOXP28300 417 aaPredicted RBP12.99□□□□□ -0.33
VARS2-207ENST00000476162 UBE2V1Q13404 147 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 MMDQ15546 238 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 TEPPQ6URK8 271 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 ALKBH7Q9BT30 221 aaPredicted RBP12.99□□□□□ -0.33
VARS2-207ENST00000476162 RAXQ9Y2V3 346 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 ARFGEF3Q5TH69 2177 aa12.99□□□□□ -0.33
VARS2-207ENST00000476162 IGHV1-69-2A0A0G2JMI3 117 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 A0A1B0GUS0 222 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 APOA2P02652 100 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 UBE2G2P60604 165 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 RPL23P62829 140 aaKnown RBP12.98□□□□□ -0.33
VARS2-207ENST00000476162 DIAPH2-AS1Q14236 149 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 CLEC2AQ6UVW9 174 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 OR5AN1Q8NGI8 311 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 OR10X1Q8NGY0 326 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 NEIL1Q96FI4 390 aaPredicted RBP12.98□□□□□ -0.33
VARS2-207ENST00000476162 HARBI1Q96MB7 349 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 BET1LQ9NYM9 111 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 RELNP78509 3460 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 IGF2RP11717 2491 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 FAM90A27PA6NNH2 459 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 NPPCP23582 126 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 TMEM249Q2WGJ8 235 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 CST9LP1Q5W188 147 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 Q6ZWC4 215 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 OSR1Q8TAX0 266 aaPredicted RBP12.98□□□□□ -0.33
VARS2-207ENST00000476162 VAMP8Q9BV40 100 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 KAAG1Q9UBP8 84 aa12.98□□□□□ -0.33
VARS2-207ENST00000476162 B9A039 149 aa12.97□□□□□ -0.33
VARS2-207ENST00000476162 TOMM40O96008 361 aa12.97□□□□□ -0.33
VARS2-207ENST00000476162 ARL14EPLP0DKL9 152 aa12.97□□□□□ -0.33
VARS2-207ENST00000476162 GRNP28799 593 aaKnown RBP12.97□□□□□ -0.33
VARS2-207ENST00000476162 EFNB3Q15768 340 aa12.97□□□□□ -0.33
VARS2-207ENST00000476162 OR5G3P0C626 314 aa12.97□□□□□ -0.33
VARS2-207ENST00000476162 ATP5G3P48201 142 aa12.97□□□□□ -0.33
VARS2-207ENST00000476162 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
VARS2-207ENST00000476162 RNF151Q2KHN1 245 aa12.97□□□□□ -0.33
VARS2-207ENST00000476162 SMIM15Q7Z3B0 74 aa12.97□□□□□ -0.33
VARS2-207ENST00000476162 STPG3Q8N7X2 389 aa12.97□□□□□ -0.33
VARS2-207ENST00000476162 STAG3L2P0CL84 134 aa12.96□□□□□ -0.33
VARS2-207ENST00000476162 STAG3L3P0CL85 134 aa12.96□□□□□ -0.33
VARS2-207ENST00000476162 IGFBP2P18065 325 aa12.96□□□□□ -0.33
VARS2-207ENST00000476162 SRP14P37108 136 aaKnown RBP12.96□□□□□ -0.33
VARS2-207ENST00000476162 CA7P43166 264 aa12.96□□□□□ -0.33
VARS2-207ENST00000476162 DLX6P56179 175 aa12.96□□□□□ -0.33
VARS2-207ENST00000476162 MOB3BQ86TA1 216 aa12.96□□□□□ -0.33
VARS2-207ENST00000476162 NUDT10Q8NFP7 164 aa12.96□□□□□ -0.33
VARS2-207ENST00000476162 OR10W1Q8NGF6 305 aa12.96□□□□□ -0.33
VARS2-207ENST00000476162 OR5B3Q8NH48 314 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms