RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 CHRDL1Q9BU40 450 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 PDCD10Q9BUL8 212 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 C6orf62Q9GZU0 229 aaPredicted RBP7.09□□□□□ -1.27
PDPN-204ENST00000475043 SRD5A3Q9H8P0 318 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 CCDC59Q9P031 241 aaKnown RBP7.09□□□□□ -1.27
PDPN-204ENST00000475043 MRPL27Q9P0M9 148 aaKnown RBP7.09□□□□□ -1.27
PDPN-204ENST00000475043 C14orf166Q9Y224 244 aaKnown RBP7.09□□□□□ -1.27
PDPN-204ENST00000475043 CEPT1Q9Y6K0 416 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 TEX13DA0A0J9YY54 714 aaPredicted RBP7.08□□□□□ -1.28
PDPN-204ENST00000475043 DISC1C4P0D8 188 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 K7EIM0 57 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 NUPL2O15504 423 aaKnown RBP7.08□□□□□ -1.28
PDPN-204ENST00000475043 IFNA17P01571 189 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 IGKV1-5P01602 117 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 IGHV3-48P01763 117 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 LYL1P12980 280 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 SNCAP37840 140 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 RPL5P46777 297 aaKnown RBP7.08□□□□□ -1.28
PDPN-204ENST00000475043 ELLP55199 621 aaPredicted RBP7.08□□□□□ -1.28
PDPN-204ENST00000475043 MEF2DQ14814 521 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 ANKRD55Q3KP44 614 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 OR2C3Q8N628 320 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 SLC35G3Q8N808 338 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 SMIM4Q8WVI0 70 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 TMEM190Q8WZ59 177 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 RRNAD1Q96FB5 475 aaKnown RBP7.08□□□□□ -1.28
PDPN-204ENST00000475043 CITED4Q96RK1 184 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 BCL7BQ9BQE9 202 aa7.08□□□□□ -1.28
PDPN-204ENST00000475043 ZNF436Q9C0F3 470 aaPredicted RBP7.08□□□□□ -1.28
PDPN-204ENST00000475043 DAZ1Q9NQZ3 744 aaKnown RBP7.08□□□□□ -1.28
PDPN-204ENST00000475043 GAR1Q9NY12 217 aaKnown RBP7.08□□□□□ -1.28
PDPN-204ENST00000475043 RBMY1BA6NDE4 496 aaKnown RBP7.07□□□□□ -1.28
PDPN-204ENST00000475043 RBMY1EA6NEQ0 496 aaKnown RBP7.07□□□□□ -1.28
PDPN-204ENST00000475043 H3BMQ9 156 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 NDUFA4O00483 81 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 ST8SIA3O43173 380 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 ZNF207O43670 478 aaKnown RBP7.07□□□□□ -1.28
PDPN-204ENST00000475043 YIF1AO95070 293 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 MT-CO2P00403 227 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 CTSDP07339 412 aaPredicted RBP7.07□□□□□ -1.28
PDPN-204ENST00000475043 RBMY1DP0C7P1 496 aaKnown RBP7.07□□□□□ -1.28
PDPN-204ENST00000475043 AKAIN1P0CW23 69 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 C8orf88P0DMB2 117 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 ADMP35318 185 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 MFAP4P55083 255 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 RELQ04864 619 aaPredicted RBP7.07□□□□□ -1.28
PDPN-204ENST00000475043 CASC10Q5T4H9 136 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 ISOC1Q96CN7 298 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 ATP6V0BQ99437 205 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 RETNQ9HD89 108 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 RABL2AQ9UBK7 228 aaPredicted RBP7.07□□□□□ -1.28
PDPN-204ENST00000475043 RABL2BQ9UNT1 228 aa7.07□□□□□ -1.28
PDPN-204ENST00000475043 TRAV25A0A0B4J276 109 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 A0A0B4J293 547 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 FABP12A6NFH5 140 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 CCDC160A6NGH7 325 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 I3L2K1 104 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 CTDSPLO15194 276 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 GNG7O60262 68 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 B3GALNT1O75752 331 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 CTSGP08311 255 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 OR5AC1P0C628 307 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 UCP1P25874 307 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 ETV6P41212 452 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 HOXA1P49639 335 aaPredicted RBP7.06□□□□□ -1.28
PDPN-204ENST00000475043 SUB1P53999 127 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDPN-204ENST00000475043 ZFAND6Q6FIF0 208 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 LAMTOR1Q6IAA8 161 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 CDPF1Q6NVV7 123 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 LINC00322Q6ZN03 302 aaPredicted RBP7.06□□□□□ -1.28
PDPN-204ENST00000475043 ZNF114Q8NC26 417 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 OR51S1Q8NGJ8 323 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 OR4C16Q8NGL9 310 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 MCFD2Q8NI22 146 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 TXN2Q99757 166 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 PRRT1Q99946 306 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 FAM110AQ9BQ89 295 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 HIPK2Q9H2X6 1198 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 C5orf66Q9H5L9 145 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 ENY2Q9NPA8 101 aa7.06□□□□□ -1.28
PDPN-204ENST00000475043 A0A0G2JRQ6 117 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 ANKRD20A5PA0PJZ0 165 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 C15orf62A8K5M9 175 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 K7EMT4 169 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 CDS2O95674 445 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 P0C879 139 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 TNFSF8P32971 234 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 SURF2Q15527 256 aaPredicted RBP7.05□□□□□ -1.28
PDPN-204ENST00000475043 DUSP18Q8NEJ0 188 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 GLYATL2Q8WU03 294 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 SPAG8Q99932 426 aaPredicted RBP7.05□□□□□ -1.28
PDPN-204ENST00000475043 RTBDNQ9BSG5 229 aaPredicted RBP7.05□□□□□ -1.28
PDPN-204ENST00000475043 SLIRPQ9GZT3 109 aaKnown RBP7.05□□□□□ -1.28
PDPN-204ENST00000475043 TMEM222Q9H0R3 208 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 NAA60Q9H7X0 242 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 EDA2RQ9HAV5 297 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 MCUBQ9NWR8 336 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 RSL24D1Q9UHA3 163 aaKnown RBP7.05□□□□□ -1.28
PDPN-204ENST00000475043 UBQLN2Q9UHD9 624 aa7.05□□□□□ -1.28
PDPN-204ENST00000475043 SCP2D1Q9UJQ7 156 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms