RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 COX6B1P14854 86 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 EVI2AP22794 236 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 ATP5IP56385 69 aaPredicted RBP3.29□□□□□ -1.88
USP16-205ENST00000474835 HLA-BQ31612 363 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CT45A1Q5HYN5 189 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 MRPL14Q6P1L8 145 aaKnown RBP3.29□□□□□ -1.88
USP16-205ENST00000474835 PATE2Q6UY27 113 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 NFE4Q86UQ8 179 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 WFDC8Q8IUA0 241 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CT45A3Q8NHU0 189 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 RFESDQ8TAC1 157 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 VSTM2AQ8TAG5 236 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 ZNF418Q8TF45 676 aaPredicted RBP3.29□□□□□ -1.88
USP16-205ENST00000474835 TMEM158Q8WZ71 300 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 NINJ1Q92982 152 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CLDN23Q96B33 292 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 SPAG8Q99932 426 aaPredicted RBP3.29□□□□□ -1.88
USP16-205ENST00000474835 SOHLH2Q9NX45 425 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 MDFICQ9P1T7 246 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 IGHV5-51A0A0C4DH38 117 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 UBE2L5PA0A1B0GUS4 154 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 SPAARA0A1B0GVQ0 90 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 A0A1W2PQU0 124 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 SNURFLB1AK76 121 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 IFNA5P01569 189 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 SRIP30626 198 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CXCL12P48061 93 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 ARFRP1Q13795 201 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 RSPO4Q2I0M5 234 aaPredicted RBP3.29□□□□□ -1.88
USP16-205ENST00000474835 TMEM97Q5BJF2 176 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 ZNF709Q8N972 641 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 TXN2Q99757 166 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 MS4A5Q9H3V2 200 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 SLC39A9Q9NUM3 307 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 LIN7CQ9NUP9 197 aaKnown RBP3.29□□□□□ -1.88
USP16-205ENST00000474835 PPP1R3CQ9UQK1 317 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 MPC1Q9Y5U8 109 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 NBPF19A0A087WUL8 3843 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 NPIPA5E9PKD4 350 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 ANGPTL7O43827 346 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 ZG16O60844 167 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 EGR1P18146 543 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 GABRA2P47869 451 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 UBE2D1P51668 147 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 CRYBA4P53673 196 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 HSD52Q0P140 79 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 KLRD1Q13241 179 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 TAL2Q16559 108 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 CENPWQ5EE01 88 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 OR4C5Q8NGB2 326 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 AMELXQ99217 191 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 CLCF1Q9UBD9 225 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 RABAC1Q9UI14 185 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 NPIPA1Q9UND3 350 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 PSG8Q9UQ74 426 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 ZNF257Q9Y2Q1 563 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 SPACA6W5XKT8 324 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 CENPVL3A0A0U1RRI6 287 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 TEX48A0A1B0GUV7 120 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 hADV38S2A0JD32 116 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 OR4C46A6NHA9 309 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 NBR2O15453 112 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 TRAPPC6AO75865 159 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 IGHV3-7P01780 117 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 GATA3P23771 443 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 MC5RP33032 325 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 CFHR2P36980 270 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 IER3P46695 156 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 FOXI1Q12951 378 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 MORN5Q5VZ52 161 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 BAGE2Q86Y30 109 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 ZDHHC16Q969W1 377 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 MRAP2Q96G30 205 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 SLC25A33Q9BSK2 321 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 SAP30LQ9HAJ7 183 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 KCNS2Q9ULS6 477 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 A0A1W2PRD5 423 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 A0A1W2PRF3 423 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 A0A1W2PRM7 423 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 hDV102S1A0JD36 115 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 GAGE12HA6NDE8 117 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 ZNF850A8MQ14 1090 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 H3BMG7 143 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 GP9P14770 177 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 MPV17P39210 176 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 PLCXD2Q0VAA5 305 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 RTL8BQ17RB0 113 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 PRR30Q53SZ7 412 aaPredicted RBP3.28□□□□□ -1.88
USP16-205ENST00000474835 PSMG4Q5JS54 123 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 PRR27Q6MZM9 219 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 ZNF562Q6V9R5 426 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 OR8I2Q8N0Y5 310 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 GATSQ8NAP1 163 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 SUMF1Q8NBK3 374 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 PATE1Q8WXA2 126 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 RERGQ96A58 199 aaPredicted RBP3.28□□□□□ -1.88
USP16-205ENST00000474835 SNRNP40Q96DI7 357 aaKnown RBP3.28□□□□□ -1.88
USP16-205ENST00000474835 RAX2Q96IS3 184 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 IMMP1LQ96LU5 166 aa3.28□□□□□ -1.88
USP16-205ENST00000474835 VGLL1Q99990 258 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms