RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 ODF3L2Q3SX64 289 aa13.67□□□□□ -0.22
DNMT3A-210ENST00000474807 NXF2Q9GZY0 626 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-210ENST00000474807 UBQLN2Q9UHD9 624 aa13.67□□□□□ -0.22
DNMT3A-210ENST00000474807 SMPXQ9UHP9 88 aa13.67□□□□□ -0.22
DNMT3A-210ENST00000474807 GABARAPH6UMI1 98 aa13.66□□□□□ -0.22
DNMT3A-210ENST00000474807 IGHV3-48P01763 117 aa13.66□□□□□ -0.22
DNMT3A-210ENST00000474807 SPCS2Q15005 226 aa13.66□□□□□ -0.22
DNMT3A-210ENST00000474807 SPINK9Q5DT21 86 aa13.66□□□□□ -0.22
DNMT3A-210ENST00000474807 GPR141Q7Z602 305 aa13.66□□□□□ -0.22
DNMT3A-210ENST00000474807 ZFAND1Q8TCF1 268 aa13.66□□□□□ -0.22
DNMT3A-210ENST00000474807 PINX1Q96BK5 328 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-210ENST00000474807 COPZ2Q9P299 210 aa13.66□□□□□ -0.22
DNMT3A-210ENST00000474807 IGHV7-4-1A0A0J9YVY3 117 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 CTDSP2O14595 271 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 ST8SIA3O43173 380 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 RAB3DO95716 219 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 CTSDP07339 412 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 UCP1P25874 307 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 AKR1C2P52895 323 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 SP6Q3SY56 376 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 PVRIGQ6DKI7 326 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 STEAP1BQ6NZ63 245 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 OR13C8Q8NGS7 320 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 MARCH1Q8TCQ1 289 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 RNF2Q99496 336 aa13.65□□□□□ -0.22
DNMT3A-210ENST00000474807 OR4C46A6NHA9 309 aa13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 CHEK1O14757 476 aa13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 RGS5O15539 181 aa13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 ATG12O94817 140 aa13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 YIF1AO95070 293 aa13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 MRPS10P82664 201 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 SSBP1Q04837 148 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 SCGB2B2Q4G0G5 96 aa13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 CCDC71LQ8N9Z2 235 aa13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 TMEM116Q8NCL8 245 aa13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 RHPN1-AS1Q9BWJ2 59 aa13.64□□□□□ -0.23
DNMT3A-210ENST00000474807 TRAV14DV4A0A0A6YYC5 116 aa13.63□□□□□ -0.23
DNMT3A-210ENST00000474807 A0A0G2JRQ6 117 aa13.63□□□□□ -0.23
DNMT3A-210ENST00000474807 GNG7O60262 68 aa13.63□□□□□ -0.23
DNMT3A-210ENST00000474807 B3GALNT1O75752 331 aa13.63□□□□□ -0.23
DNMT3A-210ENST00000474807 IFNA17P01571 189 aa13.63□□□□□ -0.23
DNMT3A-210ENST00000474807 TRIM16LQ309B1 348 aa13.63□□□□□ -0.23
DNMT3A-210ENST00000474807 FAAP20Q6NZ36 180 aa13.63□□□□□ -0.23
DNMT3A-210ENST00000474807 SLC35G3Q8N808 338 aa13.63□□□□□ -0.23
DNMT3A-210ENST00000474807 RNASE2P10153 161 aaKnown RBP13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 SNCAP37840 140 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 ETV6P41212 452 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 APOC4P55056 127 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 MEF2DQ14814 521 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 FAM90A2PQ658T7 463 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 Q6ZWC4 215 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 WFDC3Q8IUB2 231 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 SMIM4Q8WVI0 70 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 RTBDNQ9BSG5 229 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 PDCD10Q9BUL8 212 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 TP53TG1Q9Y2A0 90 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 BIRC6Q9NR09 4857 aa13.62□□□□□ -0.23
DNMT3A-210ENST00000474807 IGHV3-49A0A0A0MS15 119 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 KIR2DL5BA0A0G2JN68 375 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 KIR2DL5BA0A0G2JPC4 375 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 CTDSPLO15194 276 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 CDS2O95674 445 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 NPBWR1P48145 328 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 TOMM20LQ6UXN7 152 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 Q6ZRM9 215 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 CLVS1Q8IUQ0 354 aaPredicted RBP13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 KIR2DL5AQ8N109 375 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 DUSP18Q8NEJ0 188 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 KIR2DL5BQ8NHK3 375 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 RRNAD1Q96FB5 475 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 TMEM222Q9H0R3 208 aa13.61□□□□□ -0.23
DNMT3A-210ENST00000474807 CORTO00230 105 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 UBE2CO00762 179 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 TMEM50AO95807 157 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 OR5AC1P0C628 307 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 SUB1P53999 127 aaKnown RBP eCLIP13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 SURF2Q15527 256 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 BSXQ3C1V8 233 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 AARDQ4LEZ3 155 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 LHFPL5Q8TAF8 219 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 DYNC2LI1Q8TCX1 351 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 GLYATL2Q8WU03 294 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 RAB2BQ8WUD1 216 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 ZFAND3Q9H8U3 227 aa13.6□□□□□ -0.23
DNMT3A-210ENST00000474807 IGHV3OR16-13A0A075B7E8 117 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 IGHV3-74A0A0B4J1X5 117 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 TEX13DA0A0J9YY54 714 aaPredicted RBP13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 DISC1C4P0D8 188 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 SPRY2O43597 315 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 BMI1P35226 326 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 HOXA1P49639 335 aaPredicted RBP13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 DEFB135Q30KP9 77 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 ZNF600Q6ZNG1 722 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 APRG1Q8IVJ8 170 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 FAM219AQ8IW50 185 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 OR4C16Q8NGL9 310 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 GALNT14Q96FL9 552 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 DIRAS2Q96HU8 199 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 GINS3Q9BRX5 216 aa13.59□□□□□ -0.23
DNMT3A-210ENST00000474807 VSIRQ9H7M9 311 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms