RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CCL24O00175 119 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 PRAF2O60831 178 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 SIX6O95475 246 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 IGHV3-23P01764 117 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 LGALS1P09382 135 aaKnown RBP5.37□□□□□ -1.55
LIMD1-204ENST00000474665 PAX9P55771 341 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 H2BFSP57053 126 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 MLANAQ16655 118 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 ZNF343Q6P1L6 599 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 TMEM65Q6PI78 240 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 ZBTB8BQ8NAP8 495 aaPredicted RBP5.37□□□□□ -1.55
LIMD1-204ENST00000474665 UXS1Q8NBZ7 420 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 OR1S1Q8NH92 325 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 ZNF502Q8TBZ5 544 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 USMG5Q96IX5 58 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 C11orf1Q9H5F2 150 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 FNDC4Q9H6D8 234 aaPredicted RBP5.37□□□□□ -1.55
LIMD1-204ENST00000474665 AURKAIP1Q9NWT8 199 aaPredicted RBP5.37□□□□□ -1.55
LIMD1-204ENST00000474665 MRPL36Q9P0J6 103 aaKnown RBP5.37□□□□□ -1.55
LIMD1-204ENST00000474665 FBXL7Q9UJT9 491 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 RCL1Q9Y2P8 373 aaKnown RBP5.37□□□□□ -1.55
LIMD1-204ENST00000474665 ALG5Q9Y673 324 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.36□□□□□ -1.55
LIMD1-204ENST00000474665 IGHV3-21A0A0B4J1V1 117 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 C13orf42A0A1B0GVH6 325 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 ANKRD34BA5PLL1 514 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 FAM223BA6NKX1 122 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 C15orf62A8K5M9 175 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 CEBPZOSA8MTT3 80 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 FAM90A26D6RGX4 464 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 BMPR1BO00238 502 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 DHFRP00374 187 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 IGHV3-48P01763 117 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 MBPP02686 304 aaPredicted RBP5.36□□□□□ -1.55
LIMD1-204ENST00000474665 CXCL3P19876 107 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 ADMP35318 185 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 HOXA1P49639 335 aaPredicted RBP5.36□□□□□ -1.55
LIMD1-204ENST00000474665 POLR2GP62487 172 aaKnown RBP eCLIP5.36□□□□□ -1.55
LIMD1-204ENST00000474665 ATP5G2Q06055 141 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 EXOSC2Q13868 293 aaKnown RBP5.36□□□□□ -1.55
LIMD1-204ENST00000474665 RGS21Q2M5E4 152 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 IAH1Q2TAA2 248 aaPredicted RBP5.36□□□□□ -1.55
LIMD1-204ENST00000474665 SLC25A24Q6NUK1 477 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 FAM223AQ8IWN6 122 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 MRPL41Q8IXM3 137 aaKnown RBP5.36□□□□□ -1.55
LIMD1-204ENST00000474665 LINC00482Q8N8I6 264 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 WFDC9Q8NEX5 89 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 OR11H1Q8NG94 326 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 OR1N2Q8NGR9 330 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 DTD1Q8TEA8 209 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 SCARB1Q8WTV0 552 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 OR4C12Q96R67 309 aa5.36□□□□□ -1.55
LIMD1-204ENST00000474665 PIGBOS1A0A0B4J2F0 54 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 A0A0G2JLM5 398 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 NUDT19A8MXV4 375 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 FAM25EA8MYX2 175 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 PRSS46E5RG02 174 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 PPP5D1E7EU14 171 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 H0YIZ8 118 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 SYNGR2O43760 224 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 MT-CO2P00403 227 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 IFNA21P01568 189 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 IAPPP10997 89 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 DEFA4P12838 97 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 HIST1H1BP16401 226 aaKnown RBP5.35□□□□□ -1.55
LIMD1-204ENST00000474665 MYCNOSP40205 109 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 NKX2-1P43699 371 aaPredicted RBP5.35□□□□□ -1.55
LIMD1-204ENST00000474665 SLURP1P55000 103 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 ERHP84090 104 aaKnown RBP5.35□□□□□ -1.55
LIMD1-204ENST00000474665 FCN2Q15485 313 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 C2orf83Q53S99 150 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 OR4F17Q8NGA8 305 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 VN1R17PQ8TDU5 208 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 C2orf50Q96LR7 162 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 OR4F4Q96R69 305 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 PDCD10Q9BUL8 212 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 GPN1Q9HCN4 374 aaPredicted RBP5.35□□□□□ -1.55
LIMD1-204ENST00000474665 HEYLQ9NQ87 328 aaPredicted RBP5.35□□□□□ -1.55
LIMD1-204ENST00000474665 GSKIPQ9P0R6 139 aa5.35□□□□□ -1.55
LIMD1-204ENST00000474665 LCE6AA0A183 80 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 RBMY1BA6NDE4 496 aaKnown RBP5.34□□□□□ -1.55
LIMD1-204ENST00000474665 C5orf51A6NDU8 294 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 RBMY1EA6NEQ0 496 aaKnown RBP5.34□□□□□ -1.55
LIMD1-204ENST00000474665 PMS2P5A8MQ11 134 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 K7EPK0 472 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 WRBO00258 174 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 GOSR2O14653 212 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 SSSCA1O60232 199 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 CCNKO75909 580 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 HSPB1P04792 205 aaKnown RBP5.34□□□□□ -1.55
LIMD1-204ENST00000474665 CLEC3BP05452 202 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 CTSGP08311 255 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 RBMY1DP0C7P1 496 aaKnown RBP5.34□□□□□ -1.55
LIMD1-204ENST00000474665 HOXD3P31249 432 aaPredicted RBP5.34□□□□□ -1.55
LIMD1-204ENST00000474665 SNCAP37840 140 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 HTR2BP41595 481 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 ZNF616Q08AN1 781 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 ARL16Q0P5N6 197 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 KLF5Q13887 457 aaPredicted RBP5.34□□□□□ -1.55
LIMD1-204ENST00000474665 CLEC19AQ6UXS0 136 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms