RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 DEFB114Q30KQ6 69 aa12.1□□□□□ -0.47
ITGB1-210ENST00000474568 TMED4Q7Z7H5 227 aa12.1□□□□□ -0.47
ITGB1-210ENST00000474568 SBSPONQ8IVN8 264 aa12.1□□□□□ -0.47
ITGB1-210ENST00000474568 UXS1Q8NBZ7 420 aa12.1□□□□□ -0.47
ITGB1-210ENST00000474568 WDR89Q96FK6 387 aaPredicted RBP12.1□□□□□ -0.47
ITGB1-210ENST00000474568 BSCL2Q96G97 398 aaPredicted RBP12.1□□□□□ -0.47
ITGB1-210ENST00000474568 CACNG5Q9UF02 275 aa12.1□□□□□ -0.47
ITGB1-210ENST00000474568 HUWE1Q7Z6Z7 4374 aaKnown RBP12.09□□□□□ -0.47
ITGB1-210ENST00000474568 I3L2K1 104 aa12.09□□□□□ -0.47
ITGB1-210ENST00000474568 ZNF207O43670 478 aaKnown RBP12.09□□□□□ -0.47
ITGB1-210ENST00000474568 BTNL8Q6UX41 500 aa12.09□□□□□ -0.47
ITGB1-210ENST00000474568 GTSCR1Q86UQ5 136 aa12.09□□□□□ -0.47
ITGB1-210ENST00000474568 ZNF114Q8NC26 417 aa12.09□□□□□ -0.47
ITGB1-210ENST00000474568 OR2K2Q8NGT1 345 aa12.09□□□□□ -0.47
ITGB1-210ENST00000474568 C20orf24Q9BUV8 137 aa12.09□□□□□ -0.47
ITGB1-210ENST00000474568 SRRQ9GZT4 340 aa12.09□□□□□ -0.47
ITGB1-210ENST00000474568 MLXQ9UH92 298 aa12.09□□□□□ -0.47
ITGB1-210ENST00000474568 KCNIP3Q9Y2W7 256 aa12.09□□□□□ -0.47
ITGB1-210ENST00000474568 LINC00854A0A1B0GVQ3 168 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 ZNF785A8K8V0 405 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 A8MWP6 167 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 NHLRC4P0CG21 123 aaPredicted RBP12.08□□□□□ -0.48
ITGB1-210ENST00000474568 ADMP35318 185 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 INPP1P49441 399 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 MFAP4P55083 255 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 CD81P60033 236 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 FAM219AQ8IW50 185 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 TMEM190Q8WZ59 177 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 ZNF436Q9C0F3 470 aaPredicted RBP12.08□□□□□ -0.48
ITGB1-210ENST00000474568 PALMDQ9NP74 551 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.08□□□□□ -0.48
ITGB1-210ENST00000474568 TECRQ9NZ01 308 aaKnown RBP12.08□□□□□ -0.48
ITGB1-210ENST00000474568 UFC1Q9Y3C8 167 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 TMEM56-RWDD3S4R434 201 aa12.08□□□□□ -0.48
ITGB1-210ENST00000474568 SCAF4O95104 1147 aaKnown RBP12.07□□□□□ -0.48
ITGB1-210ENST00000474568 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
ITGB1-210ENST00000474568 SUPT4H1P63272 117 aaKnown RBP12.07□□□□□ -0.48
ITGB1-210ENST00000474568 BAK1Q16611 211 aa12.07□□□□□ -0.48
ITGB1-210ENST00000474568 TRIQKQ629K1 86 aa12.07□□□□□ -0.48
ITGB1-210ENST00000474568 SPSB3Q6PJ21 355 aa12.07□□□□□ -0.48
ITGB1-210ENST00000474568 TMEM61Q8N0U2 210 aa12.07□□□□□ -0.48
ITGB1-210ENST00000474568 GALNT14Q96FL9 552 aa12.07□□□□□ -0.48
ITGB1-210ENST00000474568 U3KQK5 164 aa12.07□□□□□ -0.48
ITGB1-210ENST00000474568 CEBPZOSA8MTT3 80 aa12.06□□□□□ -0.48
ITGB1-210ENST00000474568 NUPL2O15504 423 aaKnown RBP12.06□□□□□ -0.48
ITGB1-210ENST00000474568 YIF1AO95070 293 aa12.06□□□□□ -0.48
ITGB1-210ENST00000474568 CTSGP08311 255 aa12.06□□□□□ -0.48
ITGB1-210ENST00000474568 CD7P09564 240 aa12.06□□□□□ -0.48
ITGB1-210ENST00000474568 SPCS3P61009 180 aa12.06□□□□□ -0.48
ITGB1-210ENST00000474568 LYZL2Q7Z4W2 148 aa12.06□□□□□ -0.48
ITGB1-210ENST00000474568 NEURL2Q9BR09 285 aa12.06□□□□□ -0.48
ITGB1-210ENST00000474568 WFDC10AQ9H1F0 79 aa12.06□□□□□ -0.48
ITGB1-210ENST00000474568 TUBA4BQ9H853 241 aa12.06□□□□□ -0.48
ITGB1-210ENST00000474568 NDUFA4O00483 81 aa12.05□□□□□ -0.48
ITGB1-210ENST00000474568 GNG7O60262 68 aa12.05□□□□□ -0.48
ITGB1-210ENST00000474568 ANXA3P12429 323 aa12.05□□□□□ -0.48
ITGB1-210ENST00000474568 VAMP1P23763 118 aa12.05□□□□□ -0.48
ITGB1-210ENST00000474568 CCR6P51684 374 aa12.05□□□□□ -0.48
ITGB1-210ENST00000474568 SUB1P53999 127 aaKnown RBP eCLIP12.05□□□□□ -0.48
ITGB1-210ENST00000474568 MLANAQ16655 118 aa12.05□□□□□ -0.48
ITGB1-210ENST00000474568 IL22RA2Q969J5 263 aa12.05□□□□□ -0.48
ITGB1-210ENST00000474568 HEYLQ9NQ87 328 aaPredicted RBP12.05□□□□□ -0.48
ITGB1-210ENST00000474568 C19orf73Q9NVV2 129 aa12.05□□□□□ -0.48
ITGB1-210ENST00000474568 NDUFA13Q9P0J0 144 aa12.05□□□□□ -0.48
ITGB1-210ENST00000474568 MRPL27Q9P0M9 148 aaKnown RBP12.05□□□□□ -0.48
ITGB1-210ENST00000474568 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 INS-IGF2F8WCM5 200 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 SULT1A3P0DMM9 295 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 SULT1A4P0DMN0 295 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 OPRK1P41145 380 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 ELLP55199 621 aaPredicted RBP12.04□□□□□ -0.48
ITGB1-210ENST00000474568 LGI3Q8N145 548 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 DEFB125Q8N687 156 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 DUSP18Q8NEJ0 188 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 MARC2Q969Z3 335 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 ZNF414Q96IQ9 312 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 ATP6V0BQ99437 205 aa12.04□□□□□ -0.48
ITGB1-210ENST00000474568 SDHCQ99643 169 aaPredicted RBP12.04□□□□□ -0.48
ITGB1-210ENST00000474568 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
ITGB1-210ENST00000474568 GAR1Q9NY12 217 aaKnown RBP12.04□□□□□ -0.48
ITGB1-210ENST00000474568 MRPL36Q9P0J6 103 aaKnown RBP12.04□□□□□ -0.48
ITGB1-210ENST00000474568 A0A0B4J2A0 478 aa12.03□□□□□ -0.48
ITGB1-210ENST00000474568 C8orf88P0DMB2 117 aa12.03□□□□□ -0.48
ITGB1-210ENST00000474568 NPBWR1P48145 328 aa12.03□□□□□ -0.48
ITGB1-210ENST00000474568 RELQ04864 619 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-210ENST00000474568 ANKRD55Q3KP44 614 aa12.03□□□□□ -0.48
ITGB1-210ENST00000474568 AARDQ4LEZ3 155 aa12.03□□□□□ -0.48
ITGB1-210ENST00000474568 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
ITGB1-210ENST00000474568 RBPMS2Q6ZRY4 209 aaKnown RBP12.03□□□□□ -0.48
ITGB1-210ENST00000474568 TXN2Q99757 166 aa12.03□□□□□ -0.48
ITGB1-210ENST00000474568 SLC25A21Q9BQT8 299 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-210ENST00000474568 FNDC4Q9H6D8 234 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-210ENST00000474568 SHPKQ9UHJ6 478 aa12.03□□□□□ -0.48
ITGB1-210ENST00000474568 COL7A1Q02388 2944 aa12.02□□□□□ -0.48
ITGB1-210ENST00000474568 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
ITGB1-210ENST00000474568 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
ITGB1-210ENST00000474568 FCGR2BP31994 310 aaPredicted RBP12.02□□□□□ -0.49
ITGB1-210ENST00000474568 SRPXP78539 464 aa12.02□□□□□ -0.49
ITGB1-210ENST00000474568 PPP1R1AQ13522 171 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms