RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 SSBP1Q04837 148 aaKnown RBP11.73□□□□□ -0.53
CDPF1-205ENST00000474256 PVRIGQ6DKI7 326 aa11.73□□□□□ -0.53
CDPF1-205ENST00000474256 ZFAND1Q8TCF1 268 aa11.73□□□□□ -0.53
CDPF1-205ENST00000474256 UBQLN2Q9UHD9 624 aa11.73□□□□□ -0.53
CDPF1-205ENST00000474256 OR4C46A6NHA9 309 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 GABARAPH6UMI1 98 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 CTDSP2O14595 271 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 CHEK1O14757 476 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 ATG12O94817 140 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 RAB3DO95716 219 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 IGHV3-48P01763 117 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 CTSDP07339 412 aaPredicted RBP11.72□□□□□ -0.53
CDPF1-205ENST00000474256 AKR1C2P52895 323 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 SPCS2Q15005 226 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 SPINK9Q5DT21 86 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 STEAP1BQ6NZ63 245 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 GPR141Q7Z602 305 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 TMEM116Q8NCL8 245 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 OR13C8Q8NGS7 320 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 PINX1Q96BK5 328 aaKnown RBP11.72□□□□□ -0.53
CDPF1-205ENST00000474256 RNF2Q99496 336 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 RHPN1-AS1Q9BWJ2 59 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 COPZ2Q9P299 210 aa11.72□□□□□ -0.53
CDPF1-205ENST00000474256 RGS5O15539 181 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 ST8SIA3O43173 380 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 GNG7O60262 68 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 B3GALNT1O75752 331 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 YIF1AO95070 293 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 UCP1P25874 307 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 APOC4P55056 127 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 MRPS10P82664 201 aaKnown RBP11.71□□□□□ -0.53
CDPF1-205ENST00000474256 TRIM16LQ309B1 348 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 SP6Q3SY56 376 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 SCGB2B2Q4G0G5 96 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 Q6ZWC4 215 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 WFDC3Q8IUB2 231 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 CCDC71LQ8N9Z2 235 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 MARCH1Q8TCQ1 289 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 TP53TG1Q9Y2A0 90 aa11.71□□□□□ -0.53
CDPF1-205ENST00000474256 TRAV14DV4A0A0A6YYC5 116 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 KIR2DL5BA0A0G2JN68 375 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 KIR2DL5BA0A0G2JPC4 375 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 IFNA17P01571 189 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 SNCAP37840 140 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 NPBWR1P48145 328 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 FAM90A2PQ658T7 463 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 KIR2DL5AQ8N109 375 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 SLC35G3Q8N808 338 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 DUSP18Q8NEJ0 188 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 KIR2DL5BQ8NHK3 375 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 SMIM4Q8WVI0 70 aa11.7□□□□□ -0.54
CDPF1-205ENST00000474256 IGHV3-49A0A0A0MS15 119 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 UBE2CO00762 179 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 CDS2O95674 445 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 RNASE2P10153 161 aaKnown RBP11.69□□□□□ -0.54
CDPF1-205ENST00000474256 ETV6P41212 452 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 MEF2DQ14814 521 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 AARDQ4LEZ3 155 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 FAAP20Q6NZ36 180 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 TOMM20LQ6UXN7 152 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 Q6ZRM9 215 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 RRNAD1Q96FB5 475 aaKnown RBP11.69□□□□□ -0.54
CDPF1-205ENST00000474256 RTBDNQ9BSG5 229 aaPredicted RBP11.69□□□□□ -0.54
CDPF1-205ENST00000474256 PDCD10Q9BUL8 212 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 TMEM222Q9H0R3 208 aa11.69□□□□□ -0.54
CDPF1-205ENST00000474256 CTDSPLO15194 276 aa11.68□□□□□ -0.54
CDPF1-205ENST00000474256 SPRY2O43597 315 aa11.68□□□□□ -0.54
CDPF1-205ENST00000474256 TMEM50AO95807 157 aa11.68□□□□□ -0.54
CDPF1-205ENST00000474256 BMI1P35226 326 aa11.68□□□□□ -0.54
CDPF1-205ENST00000474256 SUB1P53999 127 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDPF1-205ENST00000474256 SURF2Q15527 256 aaPredicted RBP11.68□□□□□ -0.54
CDPF1-205ENST00000474256 BSXQ3C1V8 233 aa11.68□□□□□ -0.54
CDPF1-205ENST00000474256 FAM219AQ8IW50 185 aa11.68□□□□□ -0.54
CDPF1-205ENST00000474256 GLYATL2Q8WU03 294 aa11.68□□□□□ -0.54
CDPF1-205ENST00000474256 GALNT14Q96FL9 552 aa11.68□□□□□ -0.54
CDPF1-205ENST00000474256 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
CDPF1-205ENST00000474256 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 CORTO00230 105 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 OR5AC1P0C628 307 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 HOXA1P49639 335 aaPredicted RBP11.67□□□□□ -0.54
CDPF1-205ENST00000474256 CMC4P56277 68 aaPredicted RBP11.67□□□□□ -0.54
CDPF1-205ENST00000474256 PLECQ15149 4684 aaKnown RBP11.67□□□□□ -0.54
CDPF1-205ENST00000474256 DEFB135Q30KP9 77 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 ZNF600Q6ZNG1 722 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 CLVS1Q8IUQ0 354 aaPredicted RBP11.67□□□□□ -0.54
CDPF1-205ENST00000474256 STPG3Q8N7X2 389 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 OR52E5Q8NH55 327 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 DYNC2LI1Q8TCX1 351 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 RAB2BQ8WUD1 216 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 RNF183Q96D59 192 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 GINS3Q9BRX5 216 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 FNDC4Q9H6D8 234 aaPredicted RBP11.67□□□□□ -0.54
CDPF1-205ENST00000474256 VSIRQ9H7M9 311 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 NAA60Q9H7X0 242 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 MAP6D1Q9H9H5 199 aa11.67□□□□□ -0.54
CDPF1-205ENST00000474256 CCDC59Q9P031 241 aaKnown RBP11.67□□□□□ -0.54
CDPF1-205ENST00000474256 RABL2AQ9UBK7 228 aaPredicted RBP11.67□□□□□ -0.54
CDPF1-205ENST00000474256 RABL2BQ9UNT1 228 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms