RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 ABHD12Q8N2K0 398 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 LINC00311Q8N616 119 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 TMEM116Q8NCL8 245 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 OR10A7Q8NGE5 316 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 ASB13Q8WXK3 278 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 LSM10Q969L4 123 aaKnown RBP3.62□□□□□ -1.83
UFD1-207ENST00000474226 TIMD4Q96H15 378 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 OR4C12Q96R67 309 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 TBX15Q96SF7 602 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 HSD17B10Q99714 261 aaKnown RBP3.62□□□□□ -1.83
UFD1-207ENST00000474226 ASCL2Q99929 193 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 SMIM3Q9BZL3 60 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 SIRPDQ9H106 197 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 ONECUT1Q9UBC0 465 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 FBXL17Q9UF56 701 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 MIOXQ9UGB7 285 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 POMT1Q9Y6A1 747 aa3.62□□□□□ -1.83
UFD1-207ENST00000474226 HRNRQ86YZ3 2850 aaPredicted RBP3.61□□□□□ -1.83
UFD1-207ENST00000474226 LOC105371242A0A075B767 164 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 IGHV3OR16-10A0A075B7F0 116 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 IGHV2-70DA0A0C4DH43 119 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 DUXBA0A1W2PPF3 345 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 A0A1W2PPH5 198 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 E7EUB6 86 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 RAB29O14966 203 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 CHST1O43916 411 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 OR2F2O95006 317 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 GOSR1O95249 250 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 CRYZL1O95825 349 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 TSHBP01222 138 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 LIPFP07098 398 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 CNTFRP26992 372 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 S100A11P31949 105 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 NKX2-1P43699 371 aaPredicted RBP3.61□□□□□ -1.83
UFD1-207ENST00000474226 RAB7AP51149 207 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 ZNF137PP52743 207 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 AKR1C2P52895 323 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 ATP5J2P56134 94 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 EWSR1Q01844 656 aaKnown RBP eCLIP3.61□□□□□ -1.83
UFD1-207ENST00000474226 CATR1Q13166 79 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 EXOSC2Q13868 293 aaKnown RBP3.61□□□□□ -1.83
UFD1-207ENST00000474226 ZNF345Q14585 488 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 SMCO1Q147U7 214 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 TMEM95Q3KNT9 176 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 AARDQ4LEZ3 155 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 FAM74A1Q5RGS3 127 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 C10orf55Q5SWW7 151 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 RPL7L1Q6DKI1 246 aaKnown RBP3.61□□□□□ -1.83
UFD1-207ENST00000474226 ACOT7LQ6ZUV0 252 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 VMO1Q7Z5L0 202 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 SLC7A5P1Q8MH63 180 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 TMEM252Q8N6L7 170 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 C8orf31Q8N9H6 132 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.61□□□□□ -1.83
UFD1-207ENST00000474226 MAPK1IP1LQ8NDC0 245 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 ZNF680Q8NEM1 530 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 OR9G1Q8NH87 305 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 AQP10Q96PS8 301 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 S1PR3Q99500 378 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 GON7Q9BXV9 100 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 ARL6Q9H0F7 186 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 RBKSQ9H477 322 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 SLA2Q9H6Q3 261 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 SLC35D1Q9NTN3 355 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 COMMD9Q9P000 198 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 DSCAMO60469 2012 aa3.61□□□□□ -1.83
UFD1-207ENST00000474226 CHD3Q12873 2000 aaKnown RBP3.6□□□□□ -1.83
UFD1-207ENST00000474226 IGKV3D-20A0A0C4DH25 116 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 IGHV1-3A0A0C4DH29 117 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 C15orf62A8K5M9 175 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 RNF212BA8MTL3 300 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 BUB1B-PAK6H3BSN5 160 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 TEX46H3BTG2 121 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 WRBO00258 174 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 ST8SIA3O43173 380 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 RBFOX2O43251 390 aaKnown RBP eCLIP3.6□□□□□ -1.833e-7■□□□□ 8.1
UFD1-207ENST00000474226 TXNL1O43396 289 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 B3GALNT1O75752 331 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 CST7O76096 145 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 HPRT1P00492 218 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 OPN1MWP04001 364 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 CRYGBP07316 175 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 SAA1P0DJI8 122 aaPredicted RBP3.6□□□□□ -1.83
UFD1-207ENST00000474226 OPN1MW2P0DN77 364 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 OPN1MW3P0DN78 364 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 SLC25A6P12236 298 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 PRTN3P24158 256 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 CD24P25063 80 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 RPL12P30050 165 aaKnown RBP3.6□□□□□ -1.83
UFD1-207ENST00000474226 VDAC2P45880 294 aaPredicted RBP3.6□□□□□ -1.83
UFD1-207ENST00000474226 P2RY1P47900 373 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 CYCSP99999 105 aaKnown RBP3.6□□□□□ -1.83
UFD1-207ENST00000474226 FGL1Q08830 312 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 TMEM267Q0VDI3 215 aaPredicted RBP3.6□□□□□ -1.83
UFD1-207ENST00000474226 PJVKQ0ZLH3 352 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 OR2F1Q13607 317 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 POU2AF1Q16633 256 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 TPTE2P1Q5T6R2 138 aa3.6□□□□□ -1.83
UFD1-207ENST00000474226 THOC7Q6I9Y2 204 aaKnown RBP3.6□□□□□ -1.83
UFD1-207ENST00000474226 OR4A47Q6IF82 309 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms