RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 BAK1Q16611 211 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 TMEM128Q5BJH2 165 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 SPSB3Q6PJ21 355 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 Q6ZRM9 215 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 ZNF114Q8NC26 417 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 B9D2Q9BPU9 175 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 CACFD1Q9UGQ2 172 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 CEBPZOSA8MTT3 80 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 K7EIM0 57 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 SULT1A3P0DMM9 295 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 SULT1A4P0DMN0 295 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 RBMS2Q15434 407 aaKnown RBP10.81□□□□□ -0.68
VAMP4-203ENST00000474047 HEYLQ9NQ87 328 aaPredicted RBP10.81□□□□□ -0.68
VAMP4-203ENST00000474047 UFC1Q9Y3C8 167 aa10.81□□□□□ -0.68
VAMP4-203ENST00000474047 NUPL2O15504 423 aaKnown RBP10.8□□□□□ -0.68
VAMP4-203ENST00000474047 MT-CO2P00403 227 aa10.8□□□□□ -0.68
VAMP4-203ENST00000474047 CBLN1P23435 193 aa10.8□□□□□ -0.68
VAMP4-203ENST00000474047 GTSCR1Q86UQ5 136 aa10.8□□□□□ -0.68
VAMP4-203ENST00000474047 CENPSQ8N2Z9 138 aa10.8□□□□□ -0.68
VAMP4-203ENST00000474047 OR2K2Q8NGT1 345 aa10.8□□□□□ -0.68
VAMP4-203ENST00000474047 OR52E5Q8NH55 327 aa10.8□□□□□ -0.68
VAMP4-203ENST00000474047 ATP6V0BQ99437 205 aa10.8□□□□□ -0.68
VAMP4-203ENST00000474047 TECRQ9NZ01 308 aaKnown RBP10.8□□□□□ -0.68
VAMP4-203ENST00000474047 A0A0B4J2A0 478 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 CORTO00230 105 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 GNG7O60262 68 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 NXPH3O95157 252 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 IGHV3-48P01763 117 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 CCR6P51684 374 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 SUPT4H1P63272 117 aaKnown RBP10.79□□□□□ -0.68
VAMP4-203ENST00000474047 GUCA2BQ16661 112 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 LYZL2Q7Z4W2 148 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 DUSP18Q8NEJ0 188 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 TXN2Q99757 166 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 C20orf24Q9BUV8 137 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 HIPK2Q9H2X6 1198 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 SHPKQ9UHJ6 478 aa10.79□□□□□ -0.68
VAMP4-203ENST00000474047 INS-IGF2F8WCM5 200 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 I3L2K1 104 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 RELQ04864 619 aaPredicted RBP10.78□□□□□ -0.68
VAMP4-203ENST00000474047 DEFB114Q30KQ6 69 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 CD300EQ496F6 205 aaPredicted RBP10.78□□□□□ -0.68
VAMP4-203ENST00000474047 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 UXS1Q8NBZ7 420 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 CACNG8Q8WXS5 425 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 A8MWP6 167 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 RNASE2P10153 161 aaKnown RBP10.78□□□□□ -0.68
VAMP4-203ENST00000474047 IL7P13232 177 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 HTR2BP41595 481 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 NPBWR1P48145 328 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 SMCO1Q147U7 214 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 UNQ9165/PRO28630Q6UXU0 137 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 ADAMTSL5Q6ZMM2 481 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 OR1S1Q8NH92 325 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 MARC2Q969Z3 335 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 CHRDL1Q9BU40 450 aa10.78□□□□□ -0.68
VAMP4-203ENST00000474047 ZNF436Q9C0F3 470 aaPredicted RBP10.78□□□□□ -0.68
VAMP4-203ENST00000474047 TMEM213A2RRL7 107 aa10.77□□□□□ -0.69
VAMP4-203ENST00000474047 IZUMO1RA6ND01 250 aa10.77□□□□□ -0.69
VAMP4-203ENST00000474047 NDUFA4O00483 81 aa10.77□□□□□ -0.69
VAMP4-203ENST00000474047 YIF1AO95070 293 aa10.77□□□□□ -0.69
VAMP4-203ENST00000474047 EDN2P20800 178 aa10.77□□□□□ -0.69
VAMP4-203ENST00000474047 OPRK1P41145 380 aa10.77□□□□□ -0.69
VAMP4-203ENST00000474047 ELLP55199 621 aaPredicted RBP10.77□□□□□ -0.69
VAMP4-203ENST00000474047 SDHCQ99643 169 aaPredicted RBP10.77□□□□□ -0.69
VAMP4-203ENST00000474047 ASCL2Q99929 193 aa10.77□□□□□ -0.69
VAMP4-203ENST00000474047 C7orf50Q9BRJ6 194 aaKnown RBP10.77□□□□□ -0.69
VAMP4-203ENST00000474047 MRPL27Q9P0M9 148 aaKnown RBP10.77□□□□□ -0.69
VAMP4-203ENST00000474047 SELENOKQ9Y6D0 94 aa10.77□□□□□ -0.69
VAMP4-203ENST00000474047 DUXBA0A1W2PPF3 345 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 SCGB2A1O75556 95 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 NDUFB6O95139 128 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 SFT2D2O95562 160 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 CTSGP08311 255 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 NHLRC4P0CG21 123 aaPredicted RBP10.76□□□□□ -0.69
VAMP4-203ENST00000474047 PPP1R1AQ13522 171 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 AARDQ4LEZ3 155 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 TMEM190Q8WZ59 177 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 TUBA4BQ9H853 241 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 DNAH3Q8TD57 4116 aa10.76□□□□□ -0.69
VAMP4-203ENST00000474047 PRKDCP78527 4128 aaKnown RBP10.76□□□□□ -0.69
VAMP4-203ENST00000474047 IGHV3OR16-8A0A075B7F1 116 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 A0A1B0GU03 582 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 RPS10-NUDT3A0A1W2PQS6 291 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 F8W735 103 aaPredicted RBP10.75□□□□□ -0.69
VAMP4-203ENST00000474047 FCGR2BP31994 310 aaPredicted RBP10.75□□□□□ -0.69
VAMP4-203ENST00000474047 ADMP35318 185 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 UBE2MP61081 183 aaKnown RBP10.75□□□□□ -0.69
VAMP4-203ENST00000474047 NMSQ5H8A3 153 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 RBPMS2Q6ZRY4 209 aaKnown RBP10.75□□□□□ -0.69
VAMP4-203ENST00000474047 NOXA1Q86UR1 476 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 DAZ1Q9NQZ3 744 aaKnown RBP10.75□□□□□ -0.69
VAMP4-203ENST00000474047 ZNF207O43670 478 aaKnown RBP10.75□□□□□ -0.69
VAMP4-203ENST00000474047 IFNA10P01566 189 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 FRMD6-AS1P0C7T7 363 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 CD81P60033 236 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 TNFRSF9Q07011 255 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 ANKRD55Q3KP44 614 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 BTNL8Q6UX41 500 aa10.75□□□□□ -0.69
VAMP4-203ENST00000474047 SLC24A4Q8NFF2 622 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms