RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 CMTM3Q96MX0 182 aa9.8□□□□□ -0.84
COPS7B-219ENST00000474042 GINS3Q9BRX5 216 aa9.8□□□□□ -0.84
COPS7B-219ENST00000474042 MFFQ9GZY8 342 aa9.8□□□□□ -0.84
COPS7B-219ENST00000474042 ZFAND3Q9H8U3 227 aa9.8□□□□□ -0.84
COPS7B-219ENST00000474042 IGHV3OR16-13A0A075B7E8 117 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 IGHV3-74A0A0B4J1X5 117 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 TRAV2A0A0B4J234 112 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 GNG7O60262 68 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 IGHV3-48P01763 117 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 CD5P06127 495 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 EIF4EP06730 217 aaKnown RBP9.79□□□□□ -0.84
COPS7B-219ENST00000474042 S100GP29377 79 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 HSPE1P61604 102 aaKnown RBP9.79□□□□□ -0.84
COPS7B-219ENST00000474042 LPCAT3Q6P1A2 487 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 TOMM20LQ6UXN7 152 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 H2BFWTQ7Z2G1 175 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 GBGT1Q8N5D6 347 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 OR11H2Q8NH07 326 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 OR4A16Q8NH70 328 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 ST8SIA2Q92186 375 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 YIPF6Q96EC8 236 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 SCPEP1Q9HB40 452 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 VPS13DQ5THJ4 4388 aa9.79□□□□□ -0.84
COPS7B-219ENST00000474042 INS-IGF2F8WCM5 200 aa9.78□□□□□ -0.84
COPS7B-219ENST00000474042 DFFBO76075 338 aa9.78□□□□□ -0.84
COPS7B-219ENST00000474042 CA1P00915 261 aaPredicted RBP9.78□□□□□ -0.84
COPS7B-219ENST00000474042 APOHP02749 345 aaPredicted RBP9.78□□□□□ -0.84
COPS7B-219ENST00000474042 P0C879 139 aa9.78□□□□□ -0.84
COPS7B-219ENST00000474042 RCVRNP35243 200 aa9.78□□□□□ -0.84
COPS7B-219ENST00000474042 RBMS2Q15434 407 aaKnown RBP9.78□□□□□ -0.84
COPS7B-219ENST00000474042 PVRIGQ6DKI7 326 aa9.78□□□□□ -0.84
COPS7B-219ENST00000474042 LILRB2Q8N423 598 aa9.78□□□□□ -0.84
COPS7B-219ENST00000474042 C11orf45Q8TAV5 145 aa9.78□□□□□ -0.84
COPS7B-219ENST00000474042 PINX1Q96BK5 328 aaKnown RBP9.78□□□□□ -0.84
COPS7B-219ENST00000474042 MS4A6AQ9H2W1 248 aa9.78□□□□□ -0.84
COPS7B-219ENST00000474042 ST8SIA3O43173 380 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 APOA1P02647 267 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 DEFB131AP59861 70 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 RND3P61587 244 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 TSPAN5P62079 268 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 PAFAH1B2P68402 229 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 ERHP84090 104 aaKnown RBP9.77□□□□□ -0.85
COPS7B-219ENST00000474042 ZNF600Q6ZNG1 722 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 FAM24BQ8N5W8 94 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 Q8NAQ8 132 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 FBXL17Q9UF56 701 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 PUS1Q9Y606 427 aaKnown RBP eCLIP9.77□□□□□ -0.85
COPS7B-219ENST00000474042 HERC2O95714 4834 aa9.77□□□□□ -0.85
COPS7B-219ENST00000474042 A0A1B0GU03 582 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 IGKV1-5P01602 117 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 NPBWR1P48145 328 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 TCTAP57738 103 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 LSM3P62310 102 aaKnown RBP9.76□□□□□ -0.85
COPS7B-219ENST00000474042 PRR20EP86478 221 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 PRR20CP86479 221 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 PRR20DP86480 221 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 PRR20BP86481 221 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 PRR20AP86496 221 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 TMEM187Q14656 261 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 IZUMO4Q1ZYL8 232 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 SPINK9Q5DT21 86 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 DUSP18Q8NEJ0 188 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 AGRNO00468 2067 aa9.76□□□□□ -0.85
COPS7B-219ENST00000474042 IFNA4P05014 189 aa9.75□□□□□ -0.85
COPS7B-219ENST00000474042 GIG44P09565 113 aaPredicted RBP9.75□□□□□ -0.85
COPS7B-219ENST00000474042 RNASE2P10153 161 aaKnown RBP9.75□□□□□ -0.85
COPS7B-219ENST00000474042 LEMD1Q68G75 181 aa9.75□□□□□ -0.85
COPS7B-219ENST00000474042 LHFPL1Q86WI0 220 aa9.75□□□□□ -0.85
COPS7B-219ENST00000474042 SNX29P2Q8IUI4 249 aa9.75□□□□□ -0.85
COPS7B-219ENST00000474042 SLC35G3Q8N808 338 aa9.75□□□□□ -0.85
COPS7B-219ENST00000474042 C2CD4CQ8TF44 421 aa9.75□□□□□ -0.85
COPS7B-219ENST00000474042 ZNF486Q96H40 463 aaPredicted RBP9.75□□□□□ -0.85
COPS7B-219ENST00000474042 HRH4Q9H3N8 390 aa9.75□□□□□ -0.85
COPS7B-219ENST00000474042 TMEM231Q9H6L2 316 aa9.75□□□□□ -0.85
COPS7B-219ENST00000474042 A0A0B4J293 547 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 IGHV3-66A0A0C4DH42 116 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 K7EQG2 157 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 M0QYG6 137 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 DNASE2O00115 360 aaPredicted RBP9.74□□□□□ -0.85
COPS7B-219ENST00000474042 CORTO00230 105 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 DEFB4AO15263 64 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 TMEM50AO95807 157 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 TRPT1Q86TN4 253 aaKnown RBP9.74□□□□□ -0.85
COPS7B-219ENST00000474042 GRAMD2BQ96HH9 432 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 TP53RKQ96S44 253 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 MRPL36Q9P0J6 103 aaKnown RBP9.74□□□□□ -0.85
COPS7B-219ENST00000474042 COMMD3Q9UBI1 195 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 APLNQ9ULZ1 77 aa9.74□□□□□ -0.85
COPS7B-219ENST00000474042 SMIM31A0A1B0GVY4 71 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 ELK1P19419 428 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 C4BPBP20851 252 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 CRYBB3P26998 211 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 SNCAP37840 140 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 AKR1C2P52895 323 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 NCS1P62166 190 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 BSXQ3C1V8 233 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 TMEM41BQ5BJD5 291 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 STHQ8IWL8 128 aa9.73□□□□□ -0.85
COPS7B-219ENST00000474042 FNDC4Q9H6D8 234 aaPredicted RBP9.73□□□□□ -0.85
COPS7B-219ENST00000474042 A0A087WXM4 84 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms