RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 ADMP35318 185 aa11.65□□□□□ -0.54
CLIC3-201ENST00000473911 MRPS10P82664 201 aaKnown RBP11.65□□□□□ -0.54
CLIC3-201ENST00000473911 SLC35G3Q8N808 338 aa11.65□□□□□ -0.54
CLIC3-201ENST00000473911 ZNF114Q8NC26 417 aa11.65□□□□□ -0.54
CLIC3-201ENST00000473911 OR13C8Q8NGS7 320 aa11.65□□□□□ -0.54
CLIC3-201ENST00000473911 RNASE11Q8TAA1 199 aaKnown RBP11.65□□□□□ -0.54
CLIC3-201ENST00000473911 SPAG8Q99932 426 aaPredicted RBP11.65□□□□□ -0.54
CLIC3-201ENST00000473911 PDCD10Q9BUL8 212 aa11.65□□□□□ -0.54
CLIC3-201ENST00000473911 GGTLC1Q9BX51 225 aa11.65□□□□□ -0.54
CLIC3-201ENST00000473911 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
CLIC3-201ENST00000473911 LOC102724200A0A096LPH7 203 aaPredicted RBP11.64□□□□□ -0.55
CLIC3-201ENST00000473911 I3L2K1 104 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 K7EMT4 169 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 IGHV3-48P01763 117 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 CTSGP08311 255 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 SNCAP37840 140 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 MEF2DQ14814 521 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 SP6Q3SY56 376 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 MARCH1Q8TCQ1 289 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 RRNAD1Q96FB5 475 aaKnown RBP11.64□□□□□ -0.55
CLIC3-201ENST00000473911 TXN2Q99757 166 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 KRTAP17-1Q9BYP8 105 aa11.64□□□□□ -0.55
CLIC3-201ENST00000473911 C15orf62A8K5M9 175 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 DISC1C4P0D8 188 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 TSPAN4O14817 238 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 ST8SIA3O43173 380 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 GNG7O60262 68 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 NOL3O60936 208 aaKnown RBP11.63□□□□□ -0.55
CLIC3-201ENST00000473911 CTSDP07339 412 aaPredicted RBP11.63□□□□□ -0.55
CLIC3-201ENST00000473911 HOXA1P49639 335 aaPredicted RBP11.63□□□□□ -0.55
CLIC3-201ENST00000473911 SSBP1Q04837 148 aaKnown RBP11.63□□□□□ -0.55
CLIC3-201ENST00000473911 IL18Q14116 193 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 FAAP20Q6NZ36 180 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 RAB2BQ8WUD1 216 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 DIRAS2Q96HU8 199 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 ENY2Q9NPA8 101 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 UBQLN2Q9UHD9 624 aa11.63□□□□□ -0.55
CLIC3-201ENST00000473911 C14orf166Q9Y224 244 aaKnown RBP11.63□□□□□ -0.55
CLIC3-201ENST00000473911 A0A0B4J293 547 aa11.62□□□□□ -0.55
CLIC3-201ENST00000473911 OR4C46A6NHA9 309 aa11.62□□□□□ -0.55
CLIC3-201ENST00000473911 B3GALNT1O75752 331 aa11.62□□□□□ -0.55
CLIC3-201ENST00000473911 FCGR2BP31994 310 aaPredicted RBP11.62□□□□□ -0.55
CLIC3-201ENST00000473911 IL17DQ8TAD2 202 aa11.62□□□□□ -0.55
CLIC3-201ENST00000473911 SMIM4Q8WVI0 70 aa11.62□□□□□ -0.55
CLIC3-201ENST00000473911 CCDC59Q9P031 241 aaKnown RBP11.62□□□□□ -0.55
CLIC3-201ENST00000473911 TEX13DA0A0J9YY54 714 aaPredicted RBP11.61□□□□□ -0.55
CLIC3-201ENST00000473911 P0C879 139 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 AKAIN1P0CW23 69 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 UCP1P25874 307 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 NPBWR1P48145 328 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 SUB1P53999 127 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLIC3-201ENST00000473911 TMBIM6P55061 237 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 TMEM116Q8NCL8 245 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 DUSP18Q8NEJ0 188 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 BCL7BQ9BQE9 202 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 RHPN1-AS1Q9BWJ2 59 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 C6orf62Q9GZU0 229 aaPredicted RBP11.61□□□□□ -0.55
CLIC3-201ENST00000473911 NXF2Q9GZY0 626 aaKnown RBP11.61□□□□□ -0.55
CLIC3-201ENST00000473911 RABL2AQ9UBK7 228 aaPredicted RBP11.61□□□□□ -0.55
CLIC3-201ENST00000473911 SMPXQ9UHP9 88 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 RABL2BQ9UNT1 228 aa11.61□□□□□ -0.55
CLIC3-201ENST00000473911 IGHV3-49A0A0A0MS15 119 aa11.6□□□□□ -0.55
CLIC3-201ENST00000473911 IGHV7-4-1A0A0J9YVY3 117 aa11.6□□□□□ -0.55
CLIC3-201ENST00000473911 CTDSPLO15194 276 aa11.6□□□□□ -0.55
CLIC3-201ENST00000473911 OR5AC1P0C628 307 aa11.6□□□□□ -0.55
CLIC3-201ENST00000473911 ETV6P41212 452 aa11.6□□□□□ -0.55
CLIC3-201ENST00000473911 DYNC2LI1Q8TCX1 351 aa11.6□□□□□ -0.55
CLIC3-201ENST00000473911 RNF2Q99496 336 aa11.6□□□□□ -0.55
CLIC3-201ENST00000473911 TRAV14DV4A0A0A6YYC5 116 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 INS-IGF2F8WCM5 200 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 CORTO00230 105 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 CHEK1O14757 476 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 APOC4P55056 127 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 SURF2Q15527 256 aaPredicted RBP11.59□□□□□ -0.55
CLIC3-201ENST00000473911 OR4C16Q8NGL9 310 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 OR10C1Q96KK4 312 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 PRRT1Q99946 306 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 GINS3Q9BRX5 216 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 RTBDNQ9BSG5 229 aaPredicted RBP11.59□□□□□ -0.55
CLIC3-201ENST00000473911 TMEM222Q9H0R3 208 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 NAA60Q9H7X0 242 aa11.59□□□□□ -0.55
CLIC3-201ENST00000473911 IGKV3-7A0A075B6H7 116 aa11.58□□□□□ -0.56
CLIC3-201ENST00000473911 IGHV3OR16-13A0A075B7E8 117 aa11.58□□□□□ -0.56
CLIC3-201ENST00000473911 IGHV3-74A0A0B4J1X5 117 aa11.58□□□□□ -0.56
CLIC3-201ENST00000473911 RNASE2P10153 161 aaKnown RBP11.58□□□□□ -0.56
CLIC3-201ENST00000473911 BMI1P35226 326 aa11.58□□□□□ -0.56
CLIC3-201ENST00000473911 TFPI2P48307 235 aa11.58□□□□□ -0.56
CLIC3-201ENST00000473911 DHODHQ02127 395 aa11.58□□□□□ -0.56
CLIC3-201ENST00000473911 ODF3L2Q3SX64 289 aa11.58□□□□□ -0.56
CLIC3-201ENST00000473911 FAM219AQ8IW50 185 aa11.58□□□□□ -0.56
CLIC3-201ENST00000473911 RBPMSQ93062 196 aaKnown RBP11.58□□□□□ -0.56
CLIC3-201ENST00000473911 OVOL2Q9BRP0 275 aa11.58□□□□□ -0.56
CLIC3-201ENST00000473911 RSL24D1Q9UHA3 163 aaKnown RBP11.58□□□□□ -0.56
CLIC3-201ENST00000473911 FRAS1Q86XX4 4008 aa11.57□□□□□ -0.56
CLIC3-201ENST00000473911 CDS2O95674 445 aa11.57□□□□□ -0.56
CLIC3-201ENST00000473911 OPRK1P41145 380 aa11.57□□□□□ -0.56
CLIC3-201ENST00000473911 RPL5P46777 297 aaKnown RBP11.57□□□□□ -0.56
CLIC3-201ENST00000473911 SPCS3P61009 180 aa11.57□□□□□ -0.56
CLIC3-201ENST00000473911 TOMM20LQ6UXN7 152 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms