RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 MARC2Q969Z3 335 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 CITED4Q96RK1 184 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 KRTAP17-1Q9BYP8 105 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 ZMAT4Q9H898 229 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 MCUBQ9NWR8 336 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 ZNF320A2RRD8 509 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 TMEM213A2RRL7 107 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 A8MZ25 164 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 ST8SIA3O43173 380 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 IFNA17P01571 189 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 FRMD6-AS1P0C7T7 363 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 CBLN1P23435 193 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 FCGR2BP31994 310 aaPredicted RBP9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 KLF9Q13886 244 aaPredicted RBP9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 ZNF79Q15937 498 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 IZUMO4Q1ZYL8 232 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 DEFB114Q30KQ6 69 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 AARDQ4LEZ3 155 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 SPANXN2Q5MJ10 180 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 ADAMTSL5Q6ZMM2 481 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 Q8N1Y9 231 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 TOMM5Q8N4H5 51 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 IL22RA2Q969J5 263 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 GALNT14Q96FL9 552 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 ZNF436Q9C0F3 470 aaPredicted RBP9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 ZC4H2Q9NQZ6 224 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 CACFD1Q9UGQ2 172 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 KCNIP3Q9Y2W7 256 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 UFC1Q9Y3C8 167 aa9.8□□□□□ -0.84
SHROOM3-204ENST00000473602 PIGBOS1A0A0B4J2F0 54 aa9.79□□□□□ -0.84
SHROOM3-204ENST00000473602 A6NHS1 94 aa9.79□□□□□ -0.84
SHROOM3-204ENST00000473602 CORTO00230 105 aa9.79□□□□□ -0.84
SHROOM3-204ENST00000473602 SNCAP37840 140 aa9.79□□□□□ -0.84
SHROOM3-204ENST00000473602 CD300EQ496F6 205 aaPredicted RBP9.79□□□□□ -0.84
SHROOM3-204ENST00000473602 OR52E5Q8NH55 327 aa9.79□□□□□ -0.84
SHROOM3-204ENST00000473602 TXN2Q99757 166 aa9.79□□□□□ -0.84
SHROOM3-204ENST00000473602 TMEM56-RWDD3S4R434 201 aa9.79□□□□□ -0.84
SHROOM3-204ENST00000473602 A0A0G2JRQ6 117 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 IZUMO1RA6ND01 250 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 OR2T8A6NH00 312 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 I3L2K1 104 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 NDUFA4O00483 81 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 C8orf88P0DMB2 117 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 IGHV4-30-4P0DP06 118 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 SUB1P53999 127 aaKnown RBP eCLIP9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 MFAP4P55083 255 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 SRPXP78539 464 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 Q56UQ5 140 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 TMEM268Q5VZI3 342 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 UNQ9165/PRO28630Q6UXU0 137 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 SELENOHQ8IZQ5 122 aaKnown RBP9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 LHFPL5Q8TAF8 219 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 TMEM190Q8WZ59 177 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 TMEM230Q96A57 120 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 MISP3Q96FF7 219 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 ENY2Q9NPA8 101 aa9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 MRPL27Q9P0M9 148 aaKnown RBP9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 PLECQ15149 4684 aaKnown RBP9.78□□□□□ -0.84
SHROOM3-204ENST00000473602 NUPL2O15504 423 aaKnown RBP9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 MT-CO2P00403 227 aa9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 ANXA3P12429 323 aa9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 HOXA1P49639 335 aaPredicted RBP9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 SPCS3P61009 180 aa9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 RELQ04864 619 aaPredicted RBP9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 TMEM187Q14656 261 aa9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 ZNF57Q68EA5 555 aaPredicted RBP9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 PVRIGQ6DKI7 326 aa9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 UBAC2Q8NBM4 344 aa9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 UXS1Q8NBZ7 420 aa9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 SLC25A21Q9BQT8 299 aaPredicted RBP9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 SRRQ9GZT4 340 aa9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 DAZ1Q9NQZ3 744 aaKnown RBP9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.85
SHROOM3-204ENST00000473602 IGHV3-21A0A0B4J1V1 117 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 TRAV25A0A0B4J276 109 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 A0A0B4J2A0 478 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 ZNF785A8K8V0 405 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 CTSGP08311 255 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 AKR1C4P17516 323 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 EDN2P20800 178 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 ADMP35318 185 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 TM4SF20Q53R12 229 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 SPINK9Q5DT21 86 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 Q6ZRM9 215 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 CACNG8Q8WXS5 425 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 CHRDL1Q9BU40 450 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 EDA2RQ9HAV5 297 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 CACNG5Q9UF02 275 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 MLXQ9UH92 298 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 SHPKQ9UHJ6 478 aa9.76□□□□□ -0.85
SHROOM3-204ENST00000473602 IGHV3-35A0A0C4DH35 117 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 C15orf62A8K5M9 175 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 K7EMT4 169 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 GNG7O60262 68 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 SULT1A3P0DMM9 295 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 SULT1A4P0DMN0 295 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 RNASE2P10153 161 aaKnown RBP9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 NPBWR1P48145 328 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms