RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ABHD14AQ9BUJ0 271 aa12.06□□□□□ -0.48
LMNA-213ENST00000473598 SLC45A2Q9UMX9 530 aa12.06□□□□□ -0.48
LMNA-213ENST00000473598 PRRC2AP48634 2157 aaKnown RBP12.05□□□□□ -0.48
LMNA-213ENST00000473598 TRAV30A0A087WSZ9 112 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 MAP1LC3B2A6NCE7 125 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 F6UZH7 168 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 PRSS8Q16651 343 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 NMSQ5H8A3 153 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 CT45A1Q5HYN5 189 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 TPTE2P1Q5T6R2 138 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 STPG4Q8N801 248 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 CT45A3Q8NHU0 189 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 OR5B12Q96R08 314 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 P2RX4Q99571 388 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 MAP1LC3BQ9GZQ8 125 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 IFI27L2Q9H2X8 130 aa12.05□□□□□ -0.48
LMNA-213ENST00000473598 VWC2LB2RUY7 222 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 LIPFP07098 398 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 NBEAP1P0C6P0 100 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 IGHV1-8P0DP01 117 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 VDAC1P21796 283 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 LMO4P61968 165 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 OR4B1Q8NGF8 309 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 C5orf30Q96GV9 206 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 SPIN2AQ99865 258 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 SPIN2BQ9BPZ2 258 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 RCL1Q9Y2P8 373 aaKnown RBP12.04□□□□□ -0.48
LMNA-213ENST00000473598 KIAA1324LA8MWY0 1029 aaPredicted RBP12.04□□□□□ -0.48
LMNA-213ENST00000473598 RBP4P02753 201 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 GPR12P47775 334 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 PAFAH1B2P68402 229 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 EIF4EBP1Q13541 118 aaPredicted RBP12.04□□□□□ -0.48
LMNA-213ENST00000473598 SLC25A48Q6ZT89 311 aaKnown RBP12.04□□□□□ -0.48
LMNA-213ENST00000473598 OR51G1Q8NGK1 321 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 MBD6Q96DN6 1003 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 C11orf1Q9H5F2 150 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 CREBBPQ92793 2442 aa12.04□□□□□ -0.48
LMNA-213ENST00000473598 ATP6V0CP27449 155 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 DSCR9P59020 149 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 RAB11AP62491 216 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 OCIAD2Q56VL3 154 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 OR51H1Q8NH63 302 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 TMEM37Q8WXS4 190 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 RPUSD4Q96CM3 377 aaKnown RBP12.03□□□□□ -0.48
LMNA-213ENST00000473598 GNPNAT1Q96EK6 184 aaPredicted RBP12.03□□□□□ -0.48
LMNA-213ENST00000473598 BTF3L4Q96K17 158 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 BEX4Q9NWD9 120 aaPredicted RBP12.03□□□□□ -0.48
LMNA-213ENST00000473598 ITPR3Q14573 2671 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 RNF212BA8MTL3 300 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 PITX3O75364 302 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 HRASP01112 189 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 ZFP36P26651 326 aaKnown RBP12.03□□□□□ -0.48
LMNA-213ENST00000473598 NKX2-1P43699 371 aaPredicted RBP12.03□□□□□ -0.48
LMNA-213ENST00000473598 GALR1P47211 349 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 C16orf82Q7Z2V1 217 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 LAMTOR2Q9Y2Q5 125 aa12.03□□□□□ -0.48
LMNA-213ENST00000473598 IGHV4-30-2A0A087WSY4 118 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 PIGBOS1A0A0B4J2F0 54 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 RAB29O14966 203 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 PROP1O75360 226 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 KRTAP1-3Q8IUG1 177 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 ODF3L1Q8IXM7 274 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 C8orf31Q8N9H6 132 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 TMEM133Q9H2Q1 129 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 LIN7CQ9NUP9 197 aaKnown RBP12.02□□□□□ -0.49
LMNA-213ENST00000473598 ONECUT1Q9UBC0 465 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 UQCR10Q9UDW1 63 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 NAT8Q9UHE5 227 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 PAM16Q9Y3D7 125 aa12.02□□□□□ -0.49
LMNA-213ENST00000473598 SRP14P37108 136 aaKnown RBP12.01□□□□□ -0.49
LMNA-213ENST00000473598 TPPP2P59282 170 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 ID3Q02535 119 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 MMDQ15546 238 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.01□□□□□ -0.49
LMNA-213ENST00000473598 ZNF596Q8TC21 504 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 HSD17B10Q99714 261 aaKnown RBP12.01□□□□□ -0.49
LMNA-213ENST00000473598 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 IGHV4-61A0A0C4DH41 118 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 H7BYZ3 331 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 J3QR06 171 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 M0R1W7 72 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 SERPINE2P07093 398 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
LMNA-213ENST00000473598 BCL2P10415 239 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 ZNF16P17020 682 aaPredicted RBP12.01□□□□□ -0.49
LMNA-213ENST00000473598 FGF8P55075 233 aaPredicted RBP12.01□□□□□ -0.49
LMNA-213ENST00000473598 RPL30P62888 115 aaKnown RBP12.01□□□□□ -0.49
LMNA-213ENST00000473598 CATR1Q13166 79 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 RPL39P5Q59GN2 51 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 CXorf66Q5JRM2 361 aaPredicted RBP12.01□□□□□ -0.49
LMNA-213ENST00000473598 LINC00311Q8N616 119 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 OR9G1Q8NH87 305 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 CST9LQ9H4G1 147 aa12.01□□□□□ -0.49
LMNA-213ENST00000473598 M0QZ24 198 aa12□□□□□ -0.49
LMNA-213ENST00000473598 ENSAO43768 121 aaKnown RBP12□□□□□ -0.49
LMNA-213ENST00000473598 DUTP33316 252 aaKnown RBP12□□□□□ -0.49
LMNA-213ENST00000473598 LCN2P80188 198 aa12□□□□□ -0.49
LMNA-213ENST00000473598 EWSR1Q01844 656 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms