RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 MAP2P11137 1827 aaKnown RBP7.57□□□□□ -1.2
COL6A3-210ENST00000473258 A0A0U1RRA0 63 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 AGFG2O95081 481 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 NPYP01303 97 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 REG1AP05451 166 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 NDUFV3P56181 108 aaKnown RBP7.57□□□□□ -1.2
COL6A3-210ENST00000473258 FGF12P61328 243 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 YPEL5P62699 121 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 IL11RAQ14626 422 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 C18orf32Q8TCD1 76 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 CARD19Q96LW7 228 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 OTORQ9NRC9 128 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 PSG8Q9UQ74 426 aa7.57□□□□□ -1.2
COL6A3-210ENST00000473258 TRIP11Q15643 1979 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 SPRY3O43610 288 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 CD55P08174 381 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 ZGLP1P0C6A0 271 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 APELAP0DMC3 54 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 FOXI1Q12951 378 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 ATG4DQ86TL0 474 aaPredicted RBP7.56□□□□□ -1.2
COL6A3-210ENST00000473258 METTL26Q96S19 204 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 PRO1854Q9UHT4 67 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 H0YIG0 161 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 ZNF146Q15072 292 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 SARGQ9BW04 601 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 RRN3P1Q2M238 152 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 SDK1Q7Z5N4 2213 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 K7ERJ3 54 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 WFDC2Q14508 124 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 C12orf74Q32Q52 190 aa7.56□□□□□ -1.2
COL6A3-210ENST00000473258 THAP10Q9P2Z0 257 aaPredicted RBP7.56□□□□□ -1.2
COL6A3-210ENST00000473258 MROH2AA6NES4 1674 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 D6R8Y8 96 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 HLA-DMBP28068 263 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 MST1LQ2TV78 715 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 CACNG8Q8WXS5 425 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 R3HDMLQ9H3Y0 253 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 FSCN3Q9NQT6 498 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 UQCRQO14949 82 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 FOXI2Q6ZQN5 318 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 ZPLD1Q8TCW7 415 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 CXCL16Q9H2A7 254 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 IGHV3-64A0A075B6Q5 118 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 HCP5Q6MZN7 132 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 EBLN2Q6P2I7 272 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 CBLN3Q6UW01 205 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 Q96M66 194 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 C1RLQ9NZP8 487 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 MRC1P22897 1456 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 SMIM9A6NGZ8 99 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 RS1O15537 224 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 CD3EP07766 207 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 MORN2Q502X0 79 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 PPP1R32Q7Z5V6 425 aa7.55□□□□□ -1.2
COL6A3-210ENST00000473258 TIAF1O95411 115 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 YPEL3P61236 119 aaPredicted RBP7.54□□□□□ -1.2
COL6A3-210ENST00000473258 IFNL4K9M1U5 179 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 PATE4P0C8F1 98 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 FAM53BQ14153 422 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 COA6Q5JTJ3 125 aaKnown RBP7.54□□□□□ -1.2
COL6A3-210ENST00000473258 PRSS57Q6UWY2 283 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 BADQ92934 168 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 RNASE2P10153 161 aaKnown RBP7.54□□□□□ -1.2
COL6A3-210ENST00000473258 COX7A1P24310 79 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 ZNF138P52744 262 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 TMEM52BQ4KMG9 183 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 KLHDC9Q8NEP7 349 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 TMEM190Q8WZ59 177 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 UNC13CQ8NB66 2214 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 LOXHD1Q8IVV2 1947 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 MYMXA0A1B0GTQ4 84 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 ATP5J2P56134 94 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 KLF5Q13887 457 aaPredicted RBP7.54□□□□□ -1.2
COL6A3-210ENST00000473258 FAM57AQ8TBR7 257 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 VSIRQ9H7M9 311 aa7.54□□□□□ -1.2
COL6A3-210ENST00000473258 RIMS1Q86UR5 1692 aaKnown RBP7.54□□□□□ -1.2
COL6A3-210ENST00000473258 M0R1B8 84 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 TAX1BP3O14907 124 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 MALP21145 153 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 DSCR4P56555 118 aaPredicted RBP7.53□□□□□ -1.2
COL6A3-210ENST00000473258 ID3Q02535 119 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 TEX45Q8NA69 505 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 Q9H3A6 140 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 ABCA1O95477 2261 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 COX6B1P14854 86 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 C5orf64Q2M2E5 130 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 DDB2Q92466 427 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 C18orf12Q96KH6 178 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 IGKV3D-20A0A0C4DH25 116 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 SHISA8B8ZZ34 492 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 VPREB1P12018 145 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 SEC61GP60059 68 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 ASCL5Q7RTU5 278 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 LTBP3Q9NS15 1303 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 FAM90A27PA6NNH2 459 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 IGFBP3P17936 291 aaPredicted RBP7.53□□□□□ -1.2
COL6A3-210ENST00000473258 LGALS9BQ3B8N2 356 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 LGALS9CQ6DKI2 356 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 Q6ZUT4 128 aa7.53□□□□□ -1.2
COL6A3-210ENST00000473258 RNF166Q96A37 237 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms