RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ARL2-SNX15V9GYD0 113 aa17.22■□□□□ 0.35
COL18A1-207ENST00000473212 FNDC10F2Z333 226 aa17.21■□□□□ 0.35
COL18A1-207ENST00000473212 M0QZK8 103 aa17.21■□□□□ 0.35
COL18A1-207ENST00000473212 SUMO1P63165 101 aaKnown RBP17.21■□□□□ 0.35
COL18A1-207ENST00000473212 TMEM136Q6ZRR5 245 aa17.21■□□□□ 0.35
COL18A1-207ENST00000473212 C1orf174Q8IYL3 243 aa17.21■□□□□ 0.35
COL18A1-207ENST00000473212 ZCCHC24Q8N2G6 241 aaKnown RBP17.21■□□□□ 0.35
COL18A1-207ENST00000473212 PRNDQ9UKY0 176 aa17.21■□□□□ 0.35
COL18A1-207ENST00000473212 RPLP1P05386 114 aaKnown RBP17.21■□□□□ 0.35
COL18A1-207ENST00000473212 PRCDQ00LT1 54 aa17.21■□□□□ 0.35
COL18A1-207ENST00000473212 FAM215AQ9Y5M1 114 aa17.21■□□□□ 0.35
COL18A1-207ENST00000473212 DYSFO75923 2080 aa17.21■□□□□ 0.35
COL18A1-207ENST00000473212 MGST1P10620 155 aaKnown RBP17.2■□□□□ 0.34
COL18A1-207ENST00000473212 BRS3P32247 399 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 OR10W1Q8NGF6 305 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 ADTRPQ96IZ2 230 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 RCHY1Q96PM5 261 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 OSTCQ9NRP0 149 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 TBL2Q9Y4P3 447 aaKnown RBP17.2■□□□□ 0.34
COL18A1-207ENST00000473212 UPK2O00526 184 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 POU2AF1Q16633 256 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 CYB5R2Q6BCY4 276 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 MRPL54Q6P161 138 aaKnown RBP17.2■□□□□ 0.34
COL18A1-207ENST00000473212 WDR73Q6P4I2 378 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 ZNF439Q8NDP4 499 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 OR9G1Q8NH87 305 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 TACC2O95359 2948 aa17.2■□□□□ 0.34
COL18A1-207ENST00000473212 ANKRD11Q6UB99 2663 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-207ENST00000473212 IGLV2-8P01709 118 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 TEX50A0A1B0GTY4 177 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 MT-ND6P03923 174 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 FAM27E3Q08E93 113 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 BATFQ16520 125 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 SLC35E1Q96K37 410 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 GAFA1Q96PS6 74 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 RAB9BQ9NP90 201 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 SERTAD4Q9NUC0 356 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 ZNF586Q9NXT0 402 aa17.19■□□□□ 0.34
COL18A1-207ENST00000473212 CT45A6P0DMU7 189 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 CT45A5P0DMU8 189 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 CT45A7P0DMV0 189 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 PMCHP20382 165 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 AMTP48728 403 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 RPL19P84098 196 aaKnown RBP17.18■□□□□ 0.34
COL18A1-207ENST00000473212 ZNF257Q9Y2Q1 563 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 MBD3L4A6NDZ8 208 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-207ENST00000473212 MBD3L3A6NE82 208 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-207ENST00000473212 MBD3L5A6NJ08 208 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-207ENST00000473212 K7EM74 188 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 OR5G3P0C626 314 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 GLRXP35754 106 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 IBA57Q5T440 356 aaKnown RBP17.18■□□□□ 0.34
COL18A1-207ENST00000473212 Q8N976 141 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 NHLRC2Q8NBF2 726 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 MBD3L2Q8NHZ7 208 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-207ENST00000473212 NRN1Q9NPD7 142 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 SLC35D1Q9NTN3 355 aa17.18■□□□□ 0.34
COL18A1-207ENST00000473212 DIRC3C9JPN6 131 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 ISLRO14498 428 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 CA1P00915 261 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-207ENST00000473212 IGHV1-46P01743 117 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 TAS2R45P59539 299 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 TMEM208Q9BTX3 173 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 A0A1W2PS18 150 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 ZNF253O75346 499 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 SRIP30626 198 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 MORN5Q5VZ52 161 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 STUMQ69YW2 141 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 MRPL52Q86TS9 123 aaKnown RBP17.17■□□□□ 0.34
COL18A1-207ENST00000473212 TMEM68Q96MH6 324 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 NCOR1P1Q9H4R4 102 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 ABCA1O95477 2261 aa17.17■□□□□ 0.34
COL18A1-207ENST00000473212 TRAV5A0A0B4J249 113 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 IGHV3-48P01763 117 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 REG1BP48304 166 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 PPOXP50336 477 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 TNFAIP6P98066 277 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-207ENST00000473212 OR10J3Q5JRS4 329 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 KCNS1Q96KK3 526 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 IGF2BP2-AS1Q96M15 143 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 SLC25A33Q9BSK2 321 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 CSMD1Q96PZ7 3565 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 E7EUB6 86 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 BMPR1BO00238 502 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 AMY1AP04745 511 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 C8orf88P0DMB2 117 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 CCL8P80075 99 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 RTL8BQ17RB0 113 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 C2orf83Q53S99 150 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 TIMM23BQ5SRD1 257 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 FAM169BQ8N8A8 192 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 LINC00479Q96M42 142 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 RNF7Q9UBF6 113 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 ZGRF1Q86YA3 2104 aa17.16■□□□□ 0.34
COL18A1-207ENST00000473212 RNASE2P10153 161 aaKnown RBP17.15■□□□□ 0.34
COL18A1-207ENST00000473212 PIP4P1Q86T03 277 aa17.15■□□□□ 0.34
COL18A1-207ENST00000473212 FAM222BQ8WU58 562 aa17.15■□□□□ 0.34
COL18A1-207ENST00000473212 CDC42EP3Q9UKI2 254 aa17.15■□□□□ 0.34
COL18A1-207ENST00000473212 POLEQ07864 2286 aa17.15■□□□□ 0.34
COL18A1-207ENST00000473212 ACACAQ13085 2346 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms