RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PLXNB1O43157 2135 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 A0A1B0GW64 132 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 MFSD2BA6NFX1 497 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 H2AFB1P0C5Y9 115 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 DEFA4P12838 97 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 ACOT6Q3I5F7 207 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-206ENST00000472815 ARSJQ5FYB0 599 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-206ENST00000472815 FAM120AOSQ5T036 256 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 UQCC3Q6UW78 93 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 SLC16A13Q7RTY0 426 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 MAPK1IP1LQ8NDC0 245 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 LYPD6BQ8NI32 183 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 NANPQ8TBE9 248 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 SSX3Q99909 188 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 REG1AP05451 166 aa11.62□□□□□ -0.55
HIF3A-206ENST00000472815 CX3CL1P78423 397 aa11.62□□□□□ -0.55
HIF3A-206ENST00000472815 FFAR4Q5NUL3 377 aa11.62□□□□□ -0.55
HIF3A-206ENST00000472815 KRTAP1-3Q8IUG1 177 aa11.62□□□□□ -0.55
HIF3A-206ENST00000472815 Q8N9W7 124 aa11.62□□□□□ -0.55
HIF3A-206ENST00000472815 RBM14Q96PK6 669 aaKnown RBP11.62□□□□□ -0.55
HIF3A-206ENST00000472815 PLA2G2EQ9NZK7 142 aa11.62□□□□□ -0.55
HIF3A-206ENST00000472815 LSM4Q9Y4Z0 139 aaKnown RBP11.62□□□□□ -0.55
HIF3A-206ENST00000472815 AREGP15514 252 aa11.61□□□□□ -0.55
HIF3A-206ENST00000472815 ELLP55199 621 aaPredicted RBP11.61□□□□□ -0.55
HIF3A-206ENST00000472815 SSBP2P81877 361 aaPredicted RBP11.61□□□□□ -0.55
HIF3A-206ENST00000472815 KLF17Q5JT82 389 aaPredicted RBP11.61□□□□□ -0.55
HIF3A-206ENST00000472815 PVRIGQ6DKI7 326 aa11.61□□□□□ -0.55
HIF3A-206ENST00000472815 SLC25A33Q9BSK2 321 aa11.61□□□□□ -0.55
HIF3A-206ENST00000472815 NAV3Q8IVL0 2385 aa11.61□□□□□ -0.55
HIF3A-206ENST00000472815 I3L521 148 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 M0QZK8 103 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 M6PRP20645 277 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 FHITP49789 147 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 GAMTQ14353 236 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 C16orf82Q7Z2V1 217 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 MISP3Q96FF7 219 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 TMEM68Q96MH6 324 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 PBDC1Q9BVG4 233 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 RPRMQ9NS64 109 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 MYO9AB2RTY4 2548 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 NPIPB5A8MRT5 1133 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 AGPAT2O15120 278 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 AVPP01185 164 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 CTRB1P17538 263 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 RPL29P47914 159 aaKnown RBP11.6□□□□□ -0.55
HIF3A-206ENST00000472815 CTRB2Q6GPI1 263 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 MGST2Q99735 147 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 GGTLC1Q9BX51 225 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 ACTR3CQ9C0K3 210 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-206ENST00000472815 THYN1Q9P016 225 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 RFNGQ9Y644 331 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 AKAP9Q99996 3911 aa11.6□□□□□ -0.55
HIF3A-206ENST00000472815 APELAP0DMC3 54 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 OR10G4Q8NGN3 311 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 OR10G9Q8NGN4 311 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 OR10G7Q8NGN6 311 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 SFT2D1Q8WV19 159 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 ACY3Q96HD9 319 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 WNT10AQ9GZT5 417 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 SLC39A9Q9NUM3 307 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 PXMP4Q9Y6I8 212 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 CREBBPQ92793 2442 aa11.59□□□□□ -0.55
HIF3A-206ENST00000472815 IGHV7-81A0A0B4J1V7 117 aa11.58□□□□□ -0.56
HIF3A-206ENST00000472815 TRAV1-1A0A0B4J248 108 aa11.58□□□□□ -0.56
HIF3A-206ENST00000472815 KRBOX1C9JBD0 128 aa11.58□□□□□ -0.56
HIF3A-206ENST00000472815 CRYGCP07315 174 aa11.58□□□□□ -0.56
HIF3A-206ENST00000472815 B2MP61769 119 aa11.58□□□□□ -0.56
HIF3A-206ENST00000472815 FBLN7Q53RD9 439 aa11.58□□□□□ -0.56
HIF3A-206ENST00000472815 C5orf56Q8N8D9 126 aa11.58□□□□□ -0.56
HIF3A-206ENST00000472815 WFDC11Q8NEX6 87 aa11.58□□□□□ -0.56
HIF3A-206ENST00000472815 FAM210AQ96ND0 272 aa11.58□□□□□ -0.56
HIF3A-206ENST00000472815 CTXND1A0A1B0GTU2 59 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 A0A1W2PPV4 95 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 H3BUX3 64 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 SELENOTP62341 195 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 ACSM6Q6P461 480 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 TTC9CQ8N5M4 171 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 SGMS2Q8NHU3 365 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 MBD3L1Q8WWY6 194 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 RCC1LQ96I51 464 aaKnown RBP11.57□□□□□ -0.56
HIF3A-206ENST00000472815 FAM103A1Q9BTL3 118 aaKnown RBP11.57□□□□□ -0.56
HIF3A-206ENST00000472815 ANKRD34BA5PLL1 514 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 C9orf139Q6ZV77 190 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 STPG3Q8N7X2 389 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 OR5R1Q8NH85 324 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 PIFOQ8TCI5 191 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 C19orf24Q9BVV8 132 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 FNDC4Q9H6D8 234 aaPredicted RBP11.57□□□□□ -0.56
HIF3A-206ENST00000472815 ITPR3Q14573 2671 aa11.57□□□□□ -0.56
HIF3A-206ENST00000472815 ZFP92A6NM28 416 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 SCGB2A1O75556 95 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 MT-CO2P00403 227 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 HIST1H1BP16401 226 aaKnown RBP11.56□□□□□ -0.56
HIF3A-206ENST00000472815 CDC34P49427 236 aaPredicted RBP11.56□□□□□ -0.56
HIF3A-206ENST00000472815 PEA15Q15121 130 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 MIC13Q5XKP0 118 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 TMEM219Q86XT9 240 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 THAP8Q8NA92 274 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 TMEM116Q8NCL8 245 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms