RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 UBAC2Q8NBM4 344 aa12.87□□□□□ -0.35
COMMD3-210ENST00000472610 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
COMMD3-210ENST00000472610 MCUBQ9NWR8 336 aa12.87□□□□□ -0.35
COMMD3-210ENST00000472610 IGHV3-35A0A0C4DH35 117 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 I3L2K1 104 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 CD81P60033 236 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 GUCA2BQ16661 112 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 SELENOHQ8IZQ5 122 aaKnown RBP12.86□□□□□ -0.35
COMMD3-210ENST00000472610 DEDD2Q8WXF8 326 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 CACNG8Q8WXS5 425 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 TMEM190Q8WZ59 177 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 GALNT14Q96FL9 552 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 NEURL2Q9BR09 285 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 ENY2Q9NPA8 101 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.86□□□□□ -0.35
COMMD3-210ENST00000472610 MLXQ9UH92 298 aa12.86□□□□□ -0.35
COMMD3-210ENST00000472610 DNAH9Q9NYC9 4486 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 TRAV25A0A0B4J276 109 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 A0A0G2JRQ6 117 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 F8W735 103 aaPredicted RBP12.85□□□□□ -0.35
COMMD3-210ENST00000472610 K7EMT4 169 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 CORTO00230 105 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 NUPL2O15504 423 aaKnown RBP12.85□□□□□ -0.35
COMMD3-210ENST00000472610 MT-CO2P00403 227 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 CTSGP08311 255 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 ETV6P41212 452 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 RELQ04864 619 aaPredicted RBP12.85□□□□□ -0.35
COMMD3-210ENST00000472610 SPINK9Q5DT21 86 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 TOMM5Q8N4H5 51 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 OR52E5Q8NH55 327 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 IL22RA2Q969J5 263 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 CHRDL1Q9BU40 450 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 DAZ1Q9NQZ3 744 aaKnown RBP12.85□□□□□ -0.35
COMMD3-210ENST00000472610 CACFD1Q9UGQ2 172 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 V9GYH0 126 aa12.85□□□□□ -0.35
COMMD3-210ENST00000472610 ADMP35318 185 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 HOXA1P49639 335 aaPredicted RBP12.84□□□□□ -0.35
COMMD3-210ENST00000472610 SPCS3P61009 180 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 KLF9Q13886 244 aaPredicted RBP12.84□□□□□ -0.35
COMMD3-210ENST00000472610 ANKRD55Q3KP44 614 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 AARDQ4LEZ3 155 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 TMEM268Q5VZI3 342 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 CCDC190Q86UF4 302 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 TMEM61Q8N0U2 210 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 LHFPL5Q8TAF8 219 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 TRIM63Q969Q1 353 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 PINX1Q96BK5 328 aaKnown RBP12.84□□□□□ -0.35
COMMD3-210ENST00000472610 WDR89Q96FK6 387 aaPredicted RBP12.84□□□□□ -0.35
COMMD3-210ENST00000472610 RCHY1Q96PM5 261 aa12.84□□□□□ -0.35
COMMD3-210ENST00000472610 PIGBOS1A0A0B4J2F0 54 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 GNG7O60262 68 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 ANXA3P12429 323 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 ZNF79Q15937 498 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 SPANXN2Q5MJ10 180 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 PVRIGQ6DKI7 326 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 BTNL8Q6UX41 500 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 Q6ZRM9 215 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 RBPMS2Q6ZRY4 209 aaKnown RBP12.83□□□□□ -0.36
COMMD3-210ENST00000472610 SLC16A13Q7RTY0 426 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 DUSP18Q8NEJ0 188 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 TMEM230Q96A57 120 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 TM2D3Q9BRN9 247 aa12.83□□□□□ -0.36
COMMD3-210ENST00000472610 C15orf62A8K5M9 175 aa12.82□□□□□ -0.36
COMMD3-210ENST00000472610 CD7P09564 240 aa12.82□□□□□ -0.36
COMMD3-210ENST00000472610 RNASE2P10153 161 aaKnown RBP12.82□□□□□ -0.36
COMMD3-210ENST00000472610 AKR1C4P17516 323 aa12.82□□□□□ -0.36
COMMD3-210ENST00000472610 NPBWR1P48145 328 aa12.82□□□□□ -0.36
COMMD3-210ENST00000472610 TMEM187Q14656 261 aa12.82□□□□□ -0.36
COMMD3-210ENST00000472610 GPR146Q96CH1 333 aa12.82□□□□□ -0.36
COMMD3-210ENST00000472610 C20orf24Q9BUV8 137 aa12.82□□□□□ -0.36
COMMD3-210ENST00000472610 OR11H12B2RN74 326 aa12.81□□□□□ -0.36
COMMD3-210ENST00000472610 HTR2BP41595 481 aa12.81□□□□□ -0.36
COMMD3-210ENST00000472610 SRPXP78539 464 aa12.81□□□□□ -0.36
COMMD3-210ENST00000472610 LAMTOR1Q6IAA8 161 aa12.81□□□□□ -0.36
COMMD3-210ENST00000472610 OR52B4Q8NGK2 314 aa12.81□□□□□ -0.36
COMMD3-210ENST00000472610 SLC25A21Q9BQT8 299 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-210ENST00000472610 CACNG5Q9UF02 275 aa12.81□□□□□ -0.36
COMMD3-210ENST00000472610 A0A0B4J2A0 478 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 SCAF4O95104 1147 aaKnown RBP12.8□□□□□ -0.36
COMMD3-210ENST00000472610 SULT1A3P0DMM9 295 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 SULT1A4P0DMN0 295 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 HAGHQ16775 308 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 BSXQ3C1V8 233 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 LINC00322Q6ZN03 302 aaPredicted RBP12.8□□□□□ -0.36
COMMD3-210ENST00000472610 LGI3Q8N145 548 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 SPATA25Q9BR10 227 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 HEYLQ9NQ87 328 aaPredicted RBP12.8□□□□□ -0.36
COMMD3-210ENST00000472610 NDUFA13Q9P0J0 144 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 SELENOKQ9Y6D0 94 aa12.8□□□□□ -0.36
COMMD3-210ENST00000472610 YIF1AO95070 293 aa12.79□□□□□ -0.36
COMMD3-210ENST00000472610 IGHV3-48P01763 117 aa12.79□□□□□ -0.36
COMMD3-210ENST00000472610 SUPT4H1P63272 117 aaKnown RBP12.79□□□□□ -0.36
COMMD3-210ENST00000472610 TMEM128Q5BJH2 165 aa12.79□□□□□ -0.36
COMMD3-210ENST00000472610 DEFB125Q8N687 156 aa12.79□□□□□ -0.36
COMMD3-210ENST00000472610 OR10C1Q96KK4 312 aa12.79□□□□□ -0.36
COMMD3-210ENST00000472610 SPAG8Q99932 426 aaPredicted RBP12.79□□□□□ -0.36
COMMD3-210ENST00000472610 CEBPZOSA8MTT3 80 aa12.78□□□□□ -0.36
COMMD3-210ENST00000472610 TSPAN4O14817 238 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms