RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 FAM209BQ5JX69 171 aa13.16□□□□□ -0.3
CCM2-205ENST00000472223 OR2T35Q8NGX2 323 aa13.16□□□□□ -0.3
CCM2-205ENST00000472223 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
CCM2-205ENST00000472223 EEF1AKMT3Q96AZ1 226 aa13.16□□□□□ -0.3
CCM2-205ENST00000472223 SLC25A31Q9H0C2 315 aa13.16□□□□□ -0.3
CCM2-205ENST00000472223 ZC4H2Q9NQZ6 224 aa13.16□□□□□ -0.3
CCM2-205ENST00000472223 TSSC4Q9Y5U2 329 aaPredicted RBP13.16□□□□□ -0.3
CCM2-205ENST00000472223 NUDT19A8MXV4 375 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 H3BP45 60 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 SCGB2A1O75556 95 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 RPLP1P05386 114 aaKnown RBP13.15□□□□□ -0.3
CCM2-205ENST00000472223 CD28P10747 220 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 C15orf32Q32M92 178 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 BSXQ3C1V8 233 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 PRSS54Q6PEW0 395 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 ETV3LQ6ZN32 361 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 STX12Q86Y82 276 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 RNF152Q8N8N0 203 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 UBE2E2Q96LR5 201 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 KLK15Q9H2R5 256 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 ATRQ13535 2644 aa13.15□□□□□ -0.3
CCM2-205ENST00000472223 TRBV9A0A0B4J1U6 114 aa13.14□□□□□ -0.31
CCM2-205ENST00000472223 P2RY1P47900 373 aa13.14□□□□□ -0.31
CCM2-205ENST00000472223 C19orf35Q6ZS72 473 aa13.14□□□□□ -0.31
CCM2-205ENST00000472223 AKAP14Q86UN6 197 aa13.14□□□□□ -0.31
CCM2-205ENST00000472223 OR10P1Q8NGE3 313 aa13.14□□□□□ -0.31
CCM2-205ENST00000472223 VN1R17PQ8TDU5 208 aa13.14□□□□□ -0.31
CCM2-205ENST00000472223 CHAC2Q8WUX2 184 aa13.14□□□□□ -0.31
CCM2-205ENST00000472223 DCUN1D4Q92564 292 aa13.14□□□□□ -0.31
CCM2-205ENST00000472223 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
CCM2-205ENST00000472223 GAR1Q9NY12 217 aaKnown RBP13.14□□□□□ -0.31
CCM2-205ENST00000472223 TRBV7-1A0A0A6YYK4 115 aa13.13□□□□□ -0.31
CCM2-205ENST00000472223 CDX1P47902 265 aaPredicted RBP13.13□□□□□ -0.31
CCM2-205ENST00000472223 C11orf87Q6NUJ2 197 aa13.13□□□□□ -0.31
CCM2-205ENST00000472223 ZNF491Q8N8L2 437 aa13.13□□□□□ -0.31
CCM2-205ENST00000472223 WIPF2Q8TF74 440 aaPredicted RBP13.13□□□□□ -0.31
CCM2-205ENST00000472223 WDR89Q96FK6 387 aaPredicted RBP13.13□□□□□ -0.31
CCM2-205ENST00000472223 CITED2Q99967 270 aaPredicted RBP13.13□□□□□ -0.31
CCM2-205ENST00000472223 ZNF747Q9BV97 191 aa13.13□□□□□ -0.31
CCM2-205ENST00000472223 LYRM2Q9NU23 88 aaPredicted RBP13.13□□□□□ -0.31
CCM2-205ENST00000472223 MBD2Q9UBB5 411 aa13.13□□□□□ -0.31
CCM2-205ENST00000472223 NDUFB8O95169 186 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 MT-CO2P00403 227 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 METTL15P1P0C7V9 234 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 SLC25A4P12235 298 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 GPX4P36969 197 aaPredicted RBP13.12□□□□□ -0.31
CCM2-205ENST00000472223 MFAP4P55083 255 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 PAX9P55771 341 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 HBG1P69891 147 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 HBG2P69892 147 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 KLK9Q2XQG4 91 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 OR8G2PQ6IF36 304 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 ACSM6Q6P461 480 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 LCNL1Q6ZST4 164 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 NDUFA11Q86Y39 141 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 INO80EQ8NBZ0 244 aaPredicted RBP13.12□□□□□ -0.31
CCM2-205ENST00000472223 KLHL30-AS1Q8NEE0 82 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 CACNG8Q8WXS5 425 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 RANGRFQ9HD47 186 aaPredicted RBP13.12□□□□□ -0.31
CCM2-205ENST00000472223 OR5AC2Q9NZP5 309 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 KLK9Q9UKQ9 250 aa13.12□□□□□ -0.31
CCM2-205ENST00000472223 A0A1B0GVG6 124 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 FAM24AA6NFZ4 105 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 C15orf62A8K5M9 175 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 TMEM50AO95807 157 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 IGHV3-11P01762 117 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 NPBWR1P48145 328 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 MFAP2P55001 183 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 Q56UQ5 140 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 TMEM14EPQ6UXP3 125 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 SCARB1Q8WTV0 552 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 SLC35E1Q96K37 410 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 OR4C12Q96R67 309 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 TXN2Q99757 166 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 C21orf62Q9NYP8 219 aa13.11□□□□□ -0.31
CCM2-205ENST00000472223 FXYD6-FXYD2A0A087WZ82 144 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 IGHV3-21A0A0B4J1V1 117 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 A0A1W2PRX2 142 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 S100A11P31949 105 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 SULT1A1P50225 295 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 BAXQ07812 192 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 NSUN5P1Q3KNT7 163 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 TCTEX1D4Q5JR98 221 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 PVRIGQ6DKI7 326 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 ZNF546Q86UE3 836 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 TMEM252Q8N6L7 170 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 UBAC2Q8NBM4 344 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 C4orf3Q8WVX3 66 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 DPF1Q92782 380 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 RNF126Q9BV68 326 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 DMRT1Q9Y5R6 373 aa13.1□□□□□ -0.31
CCM2-205ENST00000472223 H0YIZ8 118 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 I3L2K1 104 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 GNG7O60262 68 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 CST7O76096 145 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 LGALS1P09382 135 aaKnown RBP13.09□□□□□ -0.31
CCM2-205ENST00000472223 RPL12P30050 165 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms