RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 RER1O15258 196 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 GMDSO60547 372 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 EDF1O60869 148 aaKnown RBP2.16□□□□□ -2.06
HDAC9-221ENST00000471887 NDUFB2O95178 105 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 ZNF682O95780 498 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 IFNW1P05000 195 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 HLA-DMAP28067 261 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 CRABP1P29762 137 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 KDELR2P33947 212 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 TGFBR2P37173 567 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 OMPP47874 163 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 FXYD6P3P58550 94 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 LCN6P62502 163 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 MAPRE2Q15555 327 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 TTMPQ5BVD1 217 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 FAM201AQ5SY85 155 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 OR2T2Q6IF00 324 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 DNM1P34Q6PK57 102 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 SMARCD3Q6STE5 483 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 SSX9Q7RTT3 188 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 MICU2Q8IYU8 434 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 VKORC1L1Q8N0U8 176 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 Q8N2B8 174 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 SPERTQ8NA61 448 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 OR11L1Q8NGX0 322 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 OR51A7Q8NH64 312 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 SLC7A6Q92536 515 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 TNFRSF14Q92956 283 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 C12orf43Q96C57 262 aaKnown RBP2.16□□□□□ -2.06
HDAC9-221ENST00000471887 Q96M85 177 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 PDCD1LG2Q9BQ51 273 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 TLNRD1Q9H1K6 362 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 SYT4Q9H2B2 425 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 CENPHQ9H3R5 247 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 TMEM100Q9NV29 134 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 CD300AQ9UGN4 299 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 CYB5R1Q9UHQ9 305 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 VPREB3Q9UKI3 123 aa2.16□□□□□ -2.06
HDAC9-221ENST00000471887 CAB39Q9Y376 341 aaPredicted RBP2.16□□□□□ -2.06
HDAC9-221ENST00000471887 DYNC2H1Q8NCM8 4307 aaKnown RBP2.16□□□□□ -2.06
HDAC9-221ENST00000471887 CD300LBA8K4G0 201 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 M0R135 149 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 M0R1W7 72 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 MRASO14807 208 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 PIN1P1O15428 100 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 XRCC2O43543 280 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 SHOX2O60902 331 aaPredicted RBP2.15□□□□□ -2.07
HDAC9-221ENST00000471887 TRBV12-3P01733 135 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 FBP1P09467 338 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 GPR4P46093 362 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 OR1E2P47887 323 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 TGM4P49221 684 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 CAV3P56539 151 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 DRAM2Q6UX65 266 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 VMO1Q7Z5L0 202 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 VTCN1Q7Z7D3 282 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 CYP4Z1Q86W10 505 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 OR5AS1Q8N127 324 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 OR6V1Q8N148 313 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 OR10Z1Q8NGY1 313 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 LZICQ8WZA0 190 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 ITFG2Q969R8 447 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 ATP6V1G3Q96LB4 118 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 ADAT1Q9BUB4 502 aaKnown RBP2.15□□□□□ -2.07
HDAC9-221ENST00000471887 CDCA4Q9BXL8 241 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 ABCB9Q9NP78 766 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 SAR1AQ9NR31 198 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 RBFOX1Q9NWB1 397 aaKnown RBP2.15□□□□□ -2.07
HDAC9-221ENST00000471887 GID8Q9NWU2 228 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 CMTM6Q9NX76 183 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 ZNF492Q9P255 531 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 RPUSD1Q9UJJ7 312 aaKnown RBP2.15□□□□□ -2.07
HDAC9-221ENST00000471887 POLR1DQ9Y2S0 133 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 ENPP4Q9Y6X5 453 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 V9GYY5 206 aaPredicted RBP2.15□□□□□ -2.07
HDAC9-221ENST00000471887 DNAH3Q8TD57 4116 aa2.15□□□□□ -2.07
HDAC9-221ENST00000471887 HUWE1Q7Z6Z7 4374 aaKnown RBP2.14□□□□□ -2.07
HDAC9-221ENST00000471887 A0A0G2JND7 137 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 TMEM210A6NLX4 147 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 J3QRE1 110 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 CXCR6O00574 342 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 BHLHE40O14503 412 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 NPFFO15130 113 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 SERPINA1P01009 418 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 GYPAP02724 150 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 PSKH1P11801 424 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 CFL1P23528 166 aaKnown RBP2.14□□□□□ -2.07
HDAC9-221ENST00000471887 RAB9AP51151 201 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 UBE2MP61081 183 aaKnown RBP2.14□□□□□ -2.07
HDAC9-221ENST00000471887 ARF6P62330 175 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 OR8G1Q15617 311 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 OR8B8Q15620 311 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 SNCBQ16143 134 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 C6orf99Q4VX62 202 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 GLYATL3Q5SZD4 288 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 RPL13AP3Q6NVV1 102 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 WDR82Q6UXN9 313 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 SLC36A1Q7Z2H8 476 aa2.14□□□□□ -2.07
HDAC9-221ENST00000471887 MRPL21Q7Z2W9 205 aaKnown RBP2.14□□□□□ -2.07
HDAC9-221ENST00000471887 NDUFA11Q86Y39 141 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms