RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 HSPE1P61604 102 aaKnown RBP5.94□□□□□ -1.46
USP48-207ENST00000471752 TSPAN5P62079 268 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 FAM90A2PQ658T7 463 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 FAAP20Q6NZ36 180 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 TOMM20LQ6UXN7 152 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 WFDC3Q8IUB2 231 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 RPP25LQ8N5L8 163 aaKnown RBP5.94□□□□□ -1.46
USP48-207ENST00000471752 OR1P1Q8NH06 330 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 CD300LFQ8TDQ1 290 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 ST8SIA2Q92186 375 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 MARC2Q969Z3 335 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 PINX1Q96BK5 328 aaKnown RBP5.94□□□□□ -1.46
USP48-207ENST00000471752 RNF183Q96D59 192 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 BSCL2Q96G97 398 aaPredicted RBP5.94□□□□□ -1.46
USP48-207ENST00000471752 SRSF8Q9BRL6 282 aaKnown RBP5.94□□□□□ -1.46
USP48-207ENST00000471752 AIFM2Q9BRQ8 373 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 FNDC4Q9H6D8 234 aaPredicted RBP5.94□□□□□ -1.46
USP48-207ENST00000471752 DAZ1Q9NQZ3 744 aaKnown RBP5.94□□□□□ -1.46
USP48-207ENST00000471752 CTDSP2O14595 271 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 NUPL2O15504 423 aaKnown RBP5.93□□□□□ -1.46
USP48-207ENST00000471752 SNAPC5O75971 98 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 DFFBO76075 338 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 GIG44P09565 113 aaPredicted RBP5.93□□□□□ -1.46
USP48-207ENST00000471752 LHFPL1Q86WI0 220 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 CROCCP3Q8IVE0 287 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 CMTM1Q8IZ96 169 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 TMEM116Q8NCL8 245 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 OR4A16Q8NH70 328 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 LHFPL5Q8TAF8 219 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 TMEM170AQ8WVE7 144 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 SPAG8Q99932 426 aaPredicted RBP5.93□□□□□ -1.46
USP48-207ENST00000471752 NXF2Q9GZY0 626 aaKnown RBP5.93□□□□□ -1.46
USP48-207ENST00000471752 MAP6D1Q9H9H5 199 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 PRR13Q9NZ81 148 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 PRNDQ9UKY0 176 aa5.93□□□□□ -1.46
USP48-207ENST00000471752 CXorf65A6NEN9 183 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 FAM25AB3EWG3 89 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 FAM25CB3EWG5 89 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 FAM25GB3EWG6 89 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 K7EMT4 169 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 ST8SIA3O43173 380 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 DEDDO75618 318 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 TMEM50AO95807 157 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 FGF2P09038 288 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 UCP3P55916 312 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 PIGPP57054 158 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 NANOS2P60321 138 aaKnown RBP5.92□□□□□ -1.46
USP48-207ENST00000471752 PRCDQ00LT1 54 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 MEF2DQ14814 521 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 SPCS2Q15005 226 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 GPR107Q5VW38 600 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 LEMD1Q68G75 181 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 H2BFWTQ7Z2G1 175 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 SLC38A6Q8IZM9 456 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 CADM3Q8N126 398 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 MARCH1Q8TCQ1 289 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 LINC00476Q8WZB0 136 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 OR10C1Q96KK4 312 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 RTBDNQ9BSG5 229 aaPredicted RBP5.92□□□□□ -1.46
USP48-207ENST00000471752 SCPEP1Q9HB40 452 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 THYN1Q9P016 225 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 PKHD1P08F94 4074 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 AGRNO00468 2067 aa5.92□□□□□ -1.46
USP48-207ENST00000471752 TRAV14DV4A0A0A6YYC5 116 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 SMIM31A0A1B0GVY4 71 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 C15orf62A8K5M9 175 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 TNFAIP8O95379 198 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 LY6G6CO95867 125 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 RNASE2P10153 161 aaKnown RBP5.91□□□□□ -1.46
USP48-207ENST00000471752 PGAM2P15259 253 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 RCVRNP35243 200 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 MFAP4P55083 255 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 ANKRD55Q3KP44 614 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 TIGITQ495A1 244 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 PVRIGQ6DKI7 326 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 SPSB3Q6PJ21 355 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 CEMP1Q6PRD7 247 aaPredicted RBP5.91□□□□□ -1.46
USP48-207ENST00000471752 Q6ZWC4 215 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 TCF24Q7RTU0 167 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 OR13C8Q8NGS7 320 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 TMEM56Q96MV1 263 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 MS4A6AQ9H2W1 248 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 EXTL2Q9UBQ6 330 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 MTFP1Q9UDX5 166 aa5.91□□□□□ -1.46
USP48-207ENST00000471752 PUS1Q9Y606 427 aaKnown RBP eCLIP5.91□□□□□ -1.46
USP48-207ENST00000471752 C3orf85A0A1B0GTC6 90 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 KNCNA6PVL3 124 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 TMEM127O75204 238 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 JTBO76095 146 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 NXPH3O95157 252 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 IGKV1-17P01599 117 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 RORCP51449 518 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 DEFB1P60022 68 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 RND3P61587 244 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 RBMS2Q15434 407 aaKnown RBP5.9□□□□□ -1.46
USP48-207ENST00000471752 THOC7Q6I9Y2 204 aaKnown RBP5.9□□□□□ -1.46
USP48-207ENST00000471752 LAMTOR1Q6IAA8 161 aa5.9□□□□□ -1.46
USP48-207ENST00000471752 HSD17B13Q7Z5P4 300 aaPredicted RBP5.9□□□□□ -1.46
USP48-207ENST00000471752 STPG3Q8N7X2 389 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms