RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ARPC5O15511 151 aa14.98□□□□□ -0.01
PSPC1-203ENST00000471658 OR2J3O76001 311 aa14.98□□□□□ -0.01
PSPC1-203ENST00000471658 NDUFB8O95169 186 aa14.98□□□□□ -0.01
PSPC1-203ENST00000471658 IGHV3-48P01763 117 aa14.98□□□□□ -0.01
PSPC1-203ENST00000471658 OR8U8P0C7N1 319 aa14.98□□□□□ -0.01
PSPC1-203ENST00000471658 RPP30P78346 268 aaKnown RBP14.98□□□□□ -0.01
PSPC1-203ENST00000471658 EWSR1Q01844 656 aaKnown RBP eCLIP14.98□□□□□ -0.01
PSPC1-203ENST00000471658 HIST2H2BDQ6DRA6 164 aa14.98□□□□□ -0.01
PSPC1-203ENST00000471658 OR4F5Q8NH21 305 aa14.98□□□□□ -0.01
PSPC1-203ENST00000471658 PINX1Q96BK5 328 aaKnown RBP14.98□□□□□ -0.01
PSPC1-203ENST00000471658 HAX1O00165 279 aa14.97□□□□□ -0.01
PSPC1-203ENST00000471658 IGHG4P01861 327 aa14.97□□□□□ -0.01
PSPC1-203ENST00000471658 PF4V1P10720 104 aa14.97□□□□□ -0.01
PSPC1-203ENST00000471658 ZFP69Q49AA0 526 aa14.97□□□□□ -0.01
PSPC1-203ENST00000471658 TMEM65Q6PI78 240 aa14.97□□□□□ -0.01
PSPC1-203ENST00000471658 KLHDC1Q8N7A1 406 aa14.97□□□□□ -0.01
PSPC1-203ENST00000471658 TMEM217Q8N7C4 229 aa14.97□□□□□ -0.01
PSPC1-203ENST00000471658 RNF114Q9Y508 228 aa14.97□□□□□ -0.01
PSPC1-203ENST00000471658 S4R3C0 116 aa14.97□□□□□ -0.01
PSPC1-203ENST00000471658 RNF222A6NCQ9 220 aa14.96□□□□□ -0.01
PSPC1-203ENST00000471658 NKX2-5P52952 324 aaPredicted RBP14.96□□□□□ -0.01
PSPC1-203ENST00000471658 AP2S1P53680 142 aaPredicted RBP14.96□□□□□ -0.01
PSPC1-203ENST00000471658 RAB11AP62491 216 aa14.96□□□□□ -0.01
PSPC1-203ENST00000471658 KRTAP24-1Q3LI83 254 aa14.96□□□□□ -0.01
PSPC1-203ENST00000471658 NOXA1Q86UR1 476 aa14.96□□□□□ -0.01
PSPC1-203ENST00000471658 GON7Q9BXV9 100 aa14.96□□□□□ -0.01
PSPC1-203ENST00000471658 FNDC4Q9H6D8 234 aaPredicted RBP14.96□□□□□ -0.01
PSPC1-203ENST00000471658 FBXL7Q9UJT9 491 aa14.96□□□□□ -0.01
PSPC1-203ENST00000471658 TRBV9A0A0B4J1U6 114 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 CLPSL1A2RUU4 121 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 PRSS46E5RG02 174 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 BOLA2-SMG1P6H3BVE0 249 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 TRGV3P03979 118 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 SLC35B1P78383 322 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 RHOGP84095 191 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 OR5AU1Q8NGC0 362 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 WIPF2Q8TF74 440 aaPredicted RBP14.95□□□□□ -0.02
PSPC1-203ENST00000471658 SLC25A31Q9H0C2 315 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 MT-CO2P00403 227 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 CXCL2P19875 107 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 PSMB8P28062 276 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 EIF2B2P49770 351 aaKnown RBP14.95□□□□□ -0.02
PSPC1-203ENST00000471658 SULT1A1P50225 295 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 RAB9AP51151 201 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 ATP5IP56385 69 aaPredicted RBP14.95□□□□□ -0.02
PSPC1-203ENST00000471658 PROK1P58294 105 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 KLK9Q2XQG4 91 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 OR1L6Q8NGR2 347 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 AQP10Q96PS8 301 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 MFFQ9GZY8 342 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 ZC4H2Q9NQZ6 224 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 MRPL36Q9P0J6 103 aaKnown RBP14.95□□□□□ -0.02
PSPC1-203ENST00000471658 KLK9Q9UKQ9 250 aa14.95□□□□□ -0.02
PSPC1-203ENST00000471658 HMSDA8MTL9 139 aa14.94□□□□□ -0.02
PSPC1-203ENST00000471658 I3L2K1 104 aa14.94□□□□□ -0.02
PSPC1-203ENST00000471658 K7EIM0 57 aa14.94□□□□□ -0.02
PSPC1-203ENST00000471658 TPPP2P59282 170 aa14.94□□□□□ -0.02
PSPC1-203ENST00000471658 TCTEX1D4Q5JR98 221 aa14.94□□□□□ -0.02
PSPC1-203ENST00000471658 TEX38Q6PEX7 206 aa14.94□□□□□ -0.02
PSPC1-203ENST00000471658 INO80EQ8NBZ0 244 aaPredicted RBP14.94□□□□□ -0.02
PSPC1-203ENST00000471658 RNASEH2CQ8TDP1 164 aaKnown RBP14.94□□□□□ -0.02
PSPC1-203ENST00000471658 SMIM3Q9BZL3 60 aa14.94□□□□□ -0.02
PSPC1-203ENST00000471658 HSPB11Q9Y547 144 aa14.94□□□□□ -0.02
PSPC1-203ENST00000471658 MFSD2BA6NFX1 497 aa14.93□□□□□ -0.02
PSPC1-203ENST00000471658 IGHV3-23P01764 117 aa14.93□□□□□ -0.02
PSPC1-203ENST00000471658 RPLP1P05386 114 aaKnown RBP14.93□□□□□ -0.02
PSPC1-203ENST00000471658 HIST1H1BP16401 226 aaKnown RBP14.93□□□□□ -0.02
PSPC1-203ENST00000471658 NUP62P37198 522 aaPredicted RBP14.93□□□□□ -0.02
PSPC1-203ENST00000471658 OPRK1P41145 380 aa14.93□□□□□ -0.02
PSPC1-203ENST00000471658 KIAA0141Q14154 515 aaPredicted RBP14.93□□□□□ -0.02
PSPC1-203ENST00000471658 ACOT7LQ6ZUV0 252 aa14.93□□□□□ -0.02
PSPC1-203ENST00000471658 STX12Q86Y82 276 aa14.93□□□□□ -0.02
PSPC1-203ENST00000471658 C11orf44Q8N8P7 122 aa14.93□□□□□ -0.02
PSPC1-203ENST00000471658 OR10P1Q8NGE3 313 aa14.93□□□□□ -0.02
PSPC1-203ENST00000471658 HYLS1Q96M11 299 aa14.93□□□□□ -0.02
PSPC1-203ENST00000471658 H3BUA1 57 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 KRTAP10-3P60369 221 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 CD69Q07108 199 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 SLC38A11Q08AI6 406 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 FOXE3Q13461 319 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 SCARB1Q8WTV0 552 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 BRI3O95415 125 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 ELANEP08246 267 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 C15orf32Q32M92 178 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 LGALSLQ3ZCW2 172 aaPredicted RBP14.92□□□□□ -0.02
PSPC1-203ENST00000471658 NECAP1Q8NC96 275 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 OR5C1Q8NGR4 320 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 WFDC1Q9HC57 220 aa14.92□□□□□ -0.02
PSPC1-203ENST00000471658 TMEM89A2RUT3 159 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 CORTO00230 105 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 CYB5BO43169 146 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 IGHV3-11P01762 117 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 CD28P10747 220 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 BAXQ07812 192 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 CLINT1Q14677 625 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 SLC16A13Q7RTY0 426 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 SLA2Q9H6Q3 261 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 THYN1Q9P016 225 aa14.91□□□□□ -0.02
PSPC1-203ENST00000471658 S100A11P31949 105 aa14.9□□□□□ -0.02
PSPC1-203ENST00000471658 GPX4P36969 197 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms