RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 ZNF266Q14584 549 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 KIAA2026Q5HYC2 2103 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 CMTM1Q8IZ96 169 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 ZFP82Q8N141 532 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 SUMF2Q8NBJ7 301 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 RNASE11Q8TAA1 199 aaKnown RBP6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 MRPL30Q8TCC3 161 aaKnown RBP6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 HIST1H2BAQ96A08 127 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR4C12Q96R67 309 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 CLCC1Q96S66 551 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 MAGT1Q9H0U3 335 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 SLC35B3Q9H1N7 401 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 C19orf73Q9NVV2 129 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 MTCH1Q9NZJ7 389 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 IL36RNQ9UBH0 155 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 FBXO7Q9Y3I1 522 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 DNAH10Q8IVF4 4471 aa6.9□□□□□ -1.31
SYNGAP1-205ENST00000470232 TRBV6-6A0A0A6YYG2 114 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 PIGBOS1A0A0B4J2F0 54 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 C7orf77A4D0Y5 90 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 LINC01548A6NM66 108 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 H0Y980 276 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 SH2D1BO14796 132 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 DEGS1O15121 323 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 ATP6V0CP27449 155 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 PSMB8P28062 276 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 RAB2AP61019 212 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 BAXQ07812 192 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 HAGHQ16775 308 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 FAM58AQ8N1B3 248 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 TMEM252Q8N6L7 170 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR2T10Q8NGZ9 312 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 PLPPR1Q8TBJ4 325 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 CD300LFQ8TDQ1 290 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 C2CD4CQ8TF44 421 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 LINC00476Q8WZB0 136 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 GNPNAT1Q96EK6 184 aaPredicted RBP6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 CABLES2Q9BTV7 478 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 ELOVL1Q9BW60 279 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 TUBA4BQ9H853 241 aa6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 LYRM2Q9NU23 88 aaPredicted RBP6.89□□□□□ -1.31
SYNGAP1-205ENST00000470232 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 IGKV1-6A0A0C4DH72 117 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 RBFOX3A6NFN3 312 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 ZNF98A6NK75 572 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 ZNF729A6NN14 1252 aaPredicted RBP6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 J3QR06 171 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 TNFSF12O43508 249 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 PGLYRP1O75594 196 aaPredicted RBP6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 DFFBO76075 338 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 NXPH3O95157 252 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 IFNA5P01569 189 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 MT-ND4LP03901 98 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR13C7P0DN81 318 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 FHITP49789 147 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 EBI3Q14213 229 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 ZNF146Q15072 292 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 RHEBQ15382 184 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 RNF212Q495C1 297 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 KRBOX4Q5JUW0 171 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 AKR1C8PQ5T2L2 129 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 SLC25A24Q6NUK1 477 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 ACSM6Q6P461 480 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 ZNF880Q6PDB4 577 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 MOB1BQ7L9L4 216 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 MOB3BQ86TA1 216 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 H1FOOQ8IZA3 346 aaPredicted RBP6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 ZNF491Q8N8L2 437 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR10V1Q8NGI7 309 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR10J5Q8NHC4 309 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 GPR146Q96CH1 333 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 ATP5SQ99766 215 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 C20orf24Q9BUV8 137 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 SCRT1Q9BWW7 348 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 COA4Q9NYJ1 87 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR6C3Q9NZP0 311 aa6.88□□□□□ -1.31
SYNGAP1-205ENST00000470232 TRAV24A0A0B4J272 114 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 A0A1B0GU03 582 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 A0A1W2PPI3 338 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 LINC01619G3V211 115 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 SIRPB1O00241 398 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 SLC33A1O00400 549 aaPredicted RBP6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 CST7O76096 145 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 HBE1P02100 147 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 IGF1P05019 195 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 SERPINE2P07093 398 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR3A1P47881 315 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 GLIPR1P48060 266 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 ID3Q02535 119 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 CFHR3Q02985 330 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 AESQ08117 197 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 NMSQ5H8A3 153 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 SOHLH1Q5JUK2 328 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 DPPA3Q6W0C5 159 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 STX12Q86Y82 276 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 Q8N1Y9 231 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR5C1Q8NGR4 320 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR10X1Q8NGY0 326 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 SFT2D1Q8WV19 159 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms