RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-211	ENST00000470199	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	TRBV7-1	A0A0A6YYK4	115 aa		13.63	□□□□□ -0.23
LMNA-211	ENST00000470199		I3L2K1	104 aa		13.63	□□□□□ -0.23
LMNA-211	ENST00000470199	WIPF1	O43516	503 aa		13.63	□□□□□ -0.23
LMNA-211	ENST00000470199	SAP30	O75446	220 aa		13.63	□□□□□ -0.23
LMNA-211	ENST00000470199	ADAP1	O75689	374 aa		13.63	□□□□□ -0.23
LMNA-211	ENST00000470199	C4orf46	Q504U0	113 aa		13.63	□□□□□ -0.23
LMNA-211	ENST00000470199	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.63	□□□□□ -0.23
LMNA-211	ENST00000470199	GGNBP1	Q5YKI7	109 aa		13.63	□□□□□ -0.23
LMNA-211	ENST00000470199	VN1R17P	Q8TDU5	208 aa		13.63	□□□□□ -0.23
LMNA-211	ENST00000470199	THYN1	Q9P016	225 aa		13.63	□□□□□ -0.23
LMNA-211	ENST00000470199	IGHV3-35	A0A0C4DH35	117 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	OR2T8	A6NH00	312 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	CEBPZOS	A8MTT3	80 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	MPTX1	A8MV57	137 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	GGCT	O75223	188 aa	Known RBP	13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	PITX3	O75364	302 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	MT-CO2	P00403	227 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	SNCA	P37840	140 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	MLANA	Q16655	118 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	BSX	Q3C1V8	233 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	PVRIG	Q6DKI7	326 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	OR9G4	Q8NGQ1	327 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	TMEM170A	Q8WVE7	144 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	PINX1	Q96BK5	328 aa	Known RBP	13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	RBKS	Q9H477	322 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	ENY2	Q9NPA8	101 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	NUDT15	Q9NV35	164 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199	C21orf62	Q9NYP8	219 aa		13.62	□□□□□ -0.23
LMNA-211	ENST00000470199		A0A1B0GU03	582 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	FAM240B	A0A1B0GVZ2	78 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	DUXB	A0A1W2PPF3	345 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	CYB5B	O43169	146 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	CSN3	P07498	182 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	TNFRSF9	Q07011	255 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	ADAMTSL5	Q6ZMM2	481 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	UBAC2	Q8NBM4	344 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	OR1L6	Q8NGR2	347 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	OR1S1	Q8NH92	325 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	ZNF414	Q96IQ9	312 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	SEC22C	Q9BRL7	303 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	CHRDL1	Q9BU40	450 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	GPR61	Q9BZJ8	451 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	HEYL	Q9NQ87	328 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	HSPB7	Q9UBY9	170 aa		13.61	□□□□□ -0.23
LMNA-211	ENST00000470199	H2AFB2	P0C5Z0	115 aa		13.6	□□□□□ -0.23
LMNA-211	ENST00000470199	MZT2B	Q6NZ67	158 aa		13.6	□□□□□ -0.23
LMNA-211	ENST00000470199	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-211	ENST00000470199	MRPL36	Q9P0J6	103 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-211	ENST00000470199	TMED3	Q9Y3Q3	217 aa		13.6	□□□□□ -0.23
LMNA-211	ENST00000470199	TGOLN2	O43493	480 aa		13.59	□□□□□ -0.23
LMNA-211	ENST00000470199	ADM	P35318	185 aa		13.59	□□□□□ -0.23
LMNA-211	ENST00000470199		Q56UQ5	140 aa		13.59	□□□□□ -0.23
LMNA-211	ENST00000470199	FAM209B	Q5JX69	171 aa		13.59	□□□□□ -0.23
LMNA-211	ENST00000470199	PLET1	Q6UQ28	207 aa		13.59	□□□□□ -0.23
LMNA-211	ENST00000470199	UNQ9165/PRO28630	Q6UXU0	137 aa		13.59	□□□□□ -0.23
LMNA-211	ENST00000470199	COQ8A	Q8NI60	647 aa		13.59	□□□□□ -0.23
LMNA-211	ENST00000470199	OR4C12	Q96R67	309 aa		13.59	□□□□□ -0.23
LMNA-211	ENST00000470199	SELENOK	Q9Y6D0	94 aa		13.59	□□□□□ -0.23
LMNA-211	ENST00000470199		K7EIL1	84 aa		13.58	□□□□□ -0.24
LMNA-211	ENST00000470199	NRARP	Q7Z6K4	114 aa		13.58	□□□□□ -0.24
LMNA-211	ENST00000470199	GPHB5	Q86YW7	130 aa		13.58	□□□□□ -0.24
LMNA-211	ENST00000470199	DTD1	Q8TEA8	209 aa		13.58	□□□□□ -0.24
LMNA-211	ENST00000470199	MITD1	Q8WV92	249 aa		13.58	□□□□□ -0.24
LMNA-211	ENST00000470199	PRR25	Q96S07	402 aa		13.58	□□□□□ -0.24
LMNA-211	ENST00000470199	ELOVL1	Q9BW60	279 aa		13.58	□□□□□ -0.24
LMNA-211	ENST00000470199	MAGT1	Q9H0U3	335 aa		13.58	□□□□□ -0.24
LMNA-211	ENST00000470199	ZNF320	A2RRD8	509 aa		13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	CTSG	P08311	255 aa		13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	IAPP	P10997	89 aa		13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	SLC25A6	P12236	298 aa		13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	HTR2B	P41595	481 aa		13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	INSL3	P51460	131 aa		13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	SUB1	P53999	127 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	TATDN3	Q17R31	274 aa		13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	SLC24A4	Q8NFF2	622 aa		13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	CACNG8	Q8WXS5	425 aa		13.57	□□□□□ -0.24
LMNA-211	ENST00000470199	IGHV3OR16-8	A0A075B7F1	116 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	CCS	O14618	274 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	IGLV1-51	P01701	117 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	SPN	P16150	400 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	MFAP4	P55083	255 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	TM4SF20	Q53R12	229 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	C2orf83	Q53S99	150 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	REC114	Q7Z4M0	266 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	ENKUR	Q8TC29	256 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	BSCL2	Q96G97	398 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	OR10C1	Q96KK4	312 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	HIPK2	Q9H2X6	1198 aa		13.56	□□□□□ -0.24
LMNA-211	ENST00000470199	C2orf70	A6NJV1	201 aa		13.55	□□□□□ -0.24
LMNA-211	ENST00000470199	LGALS9	O00182	355 aa		13.55	□□□□□ -0.24
LMNA-211	ENST00000470199	FAM106A	Q4KMX7	169 aa		13.55	□□□□□ -0.24
LMNA-211	ENST00000470199	UXS1	Q8NBZ7	420 aa		13.55	□□□□□ -0.24
LMNA-211	ENST00000470199	ZNF431	Q8TF32	576 aa	Predicted RBP	13.55	□□□□□ -0.24
LMNA-211	ENST00000470199	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.55	□□□□□ -0.24
LMNA-211	ENST00000470199	PIGBOS1	A0A0B4J2F0	54 aa		13.54	□□□□□ -0.24
LMNA-211	ENST00000470199	TMEM213	A2RRL7	107 aa		13.54	□□□□□ -0.24
LMNA-211	ENST00000470199	IZUMO1R	A6ND01	250 aa		13.54	□□□□□ -0.24
LMNA-211	ENST00000470199	IFNA10	P01566	189 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms