RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 OR4A5Q8NH83 315 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 TMEM167AQ8TBQ9 72 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 BDP1A6H8Y1 2624 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 SPENQ96T58 3664 aaKnown RBP11.07□□□□□ -0.64
BRCA1-209ENST00000470026 SNURFLB1AK76 121 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 OR7C2O60412 319 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 APOA2P02652 100 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 TIGITQ495A1 244 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 TPTE2P1Q5T6R2 138 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 WDR73Q6P4I2 378 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 RBMXL3Q8N7X1 1067 aaKnown RBP11.07□□□□□ -0.64
BRCA1-209ENST00000470026 C8orf31Q8N9H6 132 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 OR10W1Q8NGF6 305 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 FAM57AQ8TBR7 257 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 SLC25A2Q9BXI2 301 aa11.07□□□□□ -0.64
BRCA1-209ENST00000470026 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 CGB1A6NKQ9 187 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 TNFRSF13BO14836 293 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-209ENST00000470026 EREGO14944 169 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 CRYABP02511 175 aaKnown RBP11.06□□□□□ -0.64
BRCA1-209ENST00000470026 TNFRSF1AP19438 455 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 USF1P22415 310 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-209ENST00000470026 RPL8P62917 257 aaKnown RBP11.06□□□□□ -0.64
BRCA1-209ENST00000470026 RPL19P84098 196 aaKnown RBP11.06□□□□□ -0.64
BRCA1-209ENST00000470026 TMEM136Q6ZRR5 245 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 DOLPP1Q86YN1 238 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 LINC00311Q8N616 119 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 RND1Q92730 232 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 A0A1W2PN81 502 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
BRCA1-209ENST00000470026 ERHP84090 104 aaKnown RBP11.06□□□□□ -0.64
BRCA1-209ENST00000470026 TBX15Q96SF7 602 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 COMMD5Q9GZQ3 224 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
BRCA1-209ENST00000470026 CDC42EP3Q9UKI2 254 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 SVILO95425 2214 aa11.06□□□□□ -0.64
BRCA1-209ENST00000470026 YLPM1P49750 1951 aaKnown RBP11.05□□□□□ -0.64
BRCA1-209ENST00000470026 OTOGLQ3ZCN5 2332 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 C17orf100A8MU93 164 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 E7EUB6 86 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
BRCA1-209ENST00000470026 MORN5Q5VZ52 161 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 PDPNQ86YL7 162 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 ST6GALNAC6Q969X2 333 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 SNHG12Q9BXW3 62 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 DNAJC4Q9NNZ3 241 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 F2Z2F3 143 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 FSTL3O95633 263 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 IGLV2-23P01705 113 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 ZNF137PP52743 207 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 ADIPOQQ15848 244 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 OR10J3Q5JRS4 329 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 TMEM200BQ69YZ2 307 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 TMEM108Q6UXF1 575 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 MRPL52Q86TS9 123 aaKnown RBP11.05□□□□□ -0.64
BRCA1-209ENST00000470026 THAP8Q8NA92 274 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 VSTM2AQ8TAG5 236 aa11.05□□□□□ -0.64
BRCA1-209ENST00000470026 FLYWCH2Q96CP2 140 aaKnown RBP11.05□□□□□ -0.64
BRCA1-209ENST00000470026 PLCE1Q9P212 2302 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 CCL3L1P16619 93 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 RAB4AP20338 218 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 CHRNB4P30926 498 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 COMPP49747 757 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-209ENST00000470026 CCL8P80075 99 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 OR5AU1Q8NGC0 362 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 OR4C13Q8NGP0 309 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 HSPB9Q9BQS6 159 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 FNDC4Q9H6D8 234 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-209ENST00000470026 GNB4Q9HAV0 340 aa11.04□□□□□ -0.64
BRCA1-209ENST00000470026 DSPP15924 2871 aaKnown RBP11.04□□□□□ -0.64
BRCA1-209ENST00000470026 PRRC2CQ9Y520 2896 aaKnown RBP11.03□□□□□ -0.64
BRCA1-209ENST00000470026 IGKV1D-37A0A075B6S9 117 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 WT1-ASQ06250 92 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 USF2Q15853 346 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-209ENST00000470026 IBA57Q5T440 356 aaKnown RBP11.03□□□□□ -0.64
BRCA1-209ENST00000470026 PVRIGQ6DKI7 326 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 FAM231DQ6ZW35 169 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 BAGE3Q86Y29 109 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 BAGE2Q86Y30 109 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 TMEM186Q96B77 213 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 MBD6Q96DN6 1003 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 TRAV5A0A0B4J249 113 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 DPRXA6NFQ7 191 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 TMEM178BH3BS89 294 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 K7EM74 188 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 HLA-DQA1P01909 254 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 AMY1AP04745 511 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 GPX1P07203 203 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 UBE2L3P68036 154 aaKnown RBP11.03□□□□□ -0.64
BRCA1-209ENST00000470026 SSBP2P81877 361 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-209ENST00000470026 PATE2Q6UY27 113 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 TGIF2LXQ8IUE1 241 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 OR1L4Q8NGR5 311 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 NEU1Q99519 415 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 ZNF430Q9H8G1 570 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-209ENST00000470026 CBLN4Q9NTU7 201 aa11.03□□□□□ -0.64
BRCA1-209ENST00000470026 NAT8BQ9UHF3 227 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms