RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SPTA1P02549 2419 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
CBWD3-205ENST00000469687 MDFIC2A0A1B0GVS7 189 aa11.87□□□□□ -0.51
CBWD3-205ENST00000469687 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
CBWD3-205ENST00000469687 K7ENP7 123 aa11.87□□□□□ -0.51
CBWD3-205ENST00000469687 OR10J4P0C629 311 aa11.87□□□□□ -0.51
CBWD3-205ENST00000469687 C11orf42Q8N5U0 333 aa11.87□□□□□ -0.51
CBWD3-205ENST00000469687 OR4C13Q8NGP0 309 aa11.87□□□□□ -0.51
CBWD3-205ENST00000469687 ZNF430Q9H8G1 570 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-205ENST00000469687 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-205ENST00000469687 AMBPP02760 352 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 GRNP28799 593 aaKnown RBP11.86□□□□□ -0.51
CBWD3-205ENST00000469687 TMEM155Q4W5P6 130 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 FNDC4Q9H6D8 234 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-205ENST00000469687 SLC17A3O00476 420 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 SLC25A17O43808 307 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 OR7C2O60412 319 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 RPL15P61313 204 aaKnown RBP11.86□□□□□ -0.51
CBWD3-205ENST00000469687 PDPNQ86YL7 162 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 LINC01560Q8TB33 94 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 TMEM167AQ8TBQ9 72 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 ZNF596Q8TC21 504 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 C11orf52Q96A22 123 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 TMEM186Q96B77 213 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 PRDM13Q9H4Q3 707 aa11.86□□□□□ -0.51
CBWD3-205ENST00000469687 IGHV1-69-2A0A0G2JMI3 117 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 DLL1O00548 723 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 MT-CO2P00403 227 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 REG1AP05451 166 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 IGHV1-8P0DP01 117 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 USF1P22415 310 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-205ENST00000469687 CRYBB3P26998 211 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 LCN2P80188 198 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 ERHP84090 104 aaKnown RBP11.85□□□□□ -0.51
CBWD3-205ENST00000469687 OR5I1Q13606 314 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 LINC00311Q8N616 119 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 SLC35E1Q96K37 410 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 MRPL36Q9P0J6 103 aaKnown RBP11.85□□□□□ -0.51
CBWD3-205ENST00000469687 WASHC3Q9Y3C0 194 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 DMRT1Q9Y5R6 373 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 IGF2RP11717 2491 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 TRAV5A0A0B4J249 113 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 VSTM5A8MXK1 200 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 OR5G3P0C626 314 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 FOXL1Q12952 345 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 MRGPRG-AS1Q2M3A8 158 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 C9orf152Q5JTZ5 239 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 RUSC1-AS1Q66K80 236 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 TGIF2LXQ8IUE1 241 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 OR10G8Q8NGN5 311 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 KAAG1Q9UBP8 84 aa11.85□□□□□ -0.51
CBWD3-205ENST00000469687 ARHGAP32A7KAX9 2087 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 A0A1B0GUS0 222 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 PSMB11A5LHX3 300 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 GGTLC3B5MD39 225 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 AREGP15514 252 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 COA6Q5JTJ3 125 aaKnown RBP11.84□□□□□ -0.51
CBWD3-205ENST00000469687 EAF1Q96JC9 268 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-205ENST00000469687 UHRF2Q96PU4 802 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 NGBQ9NPG2 151 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 TECRQ9NZ01 308 aaKnown RBP11.84□□□□□ -0.51
CBWD3-205ENST00000469687 ABCA1O95477 2261 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
CBWD3-205ENST00000469687 APELAP0DMC3 54 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 APOBEC3AP31941 199 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-205ENST00000469687 ZNF90Q03938 601 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 C19orf35Q6ZS72 473 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 IMMP2LQ96T52 175 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 TRAPPC1Q9Y5R8 145 aa11.84□□□□□ -0.51
CBWD3-205ENST00000469687 ANKHD1Q8IWZ3 2542 aaKnown RBP11.83□□□□□ -0.51
CBWD3-205ENST00000469687 SVEP1Q4LDE5 3571 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 A0A087X0M5 115 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 A0A1B0GX30 115 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 A0A1W2PPI3 338 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 FAM90A27PA6NNH2 459 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 SIAH2O43255 324 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 HIST1H1BP16401 226 aaKnown RBP11.83□□□□□ -0.52
CBWD3-205ENST00000469687 CNTFRP26992 372 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 PDLIM4P50479 330 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 ZNF137PP52743 207 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 ATP5IP56385 69 aaPredicted RBP11.83□□□□□ -0.52
CBWD3-205ENST00000469687 LGALS4P56470 323 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 CENPWQ5EE01 88 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 FAM71F2Q6NXP2 309 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 C8orf31Q8N9H6 132 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 PFDN5Q99471 154 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 VKORC1Q9BQB6 163 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 SLC25A33Q9BSK2 321 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 TMEM167BQ9NRX6 74 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 ATRXP46100 2492 aa11.83□□□□□ -0.52
CBWD3-205ENST00000469687 C9JCJ5 164 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 CD3EP07766 207 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 FRMD6-AS1P0C7T7 363 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 SSX8Q7RTT4 187 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 VSTM2AQ8TAG5 236 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 NPIPB3Q92617 1050 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 FAM167A-AS1Q96KT0 104 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 SLC25A2Q9BXI2 301 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 HRNRQ86YZ3 2850 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-205ENST00000469687 IGKV1D-37A0A075B6S9 117 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms