RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 B4DSR2 109 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 RNF5Q99942 180 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 AURKAIP1Q9NWT8 199 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-213ENST00000469300 MSGN1A6NI15 193 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 LYNX1G3V0Z9 82 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 LYNX1P0DP58 116 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 TMEM144Q7Z5S9 345 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 OR8A1Q8NGG7 326 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 SRSF12Q8WXF0 261 aaKnown RBP12.55□□□□□ -0.4
LIMS2-213ENST00000469300 NPCDR1Q9BY65 106 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 MUC6Q6W4X9 2439 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 TMEM238LA0A1B0GVL6 79 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 A6NJY4 79 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 C15orf61A6NNL5 157 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 NPIPB6E9PJ23 425 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 COLCA1Q6ZS62 124 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 LINC00305Q7Z4B0 112 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 ANAPC1Q9H1A4 1944 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 PCNX2A6NKB5 2137 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 UBE2CO00762 179 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 MYOD1P15172 320 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 DUTP33316 252 aaKnown RBP12.54□□□□□ -0.4
LIMS2-213ENST00000469300 NMUP48645 174 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 ZNF324BQ6AW86 544 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-213ENST00000469300 MYOZ3Q8TDC0 251 aa12.54□□□□□ -0.4
LIMS2-213ENST00000469300 IGKV1D-13A0A0B4J2D9 117 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 IGKV1-13P0DP09 117 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 GPX1P07203 203 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 NBEAP1P0C6P0 100 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 FOLR2P14207 255 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 SLC25A16P16260 332 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 WNT10AQ9GZT5 417 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 RPRMQ9NS64 109 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 MYLKQ15746 1914 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 TRBV6-6A0A0A6YYG2 114 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 BTCP35070 178 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 CX3CL1P78423 397 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 PEMTQ9UBM1 199 aa12.53□□□□□ -0.4
LIMS2-213ENST00000469300 M0R1W7 72 aa12.52□□□□□ -0.4
LIMS2-213ENST00000469300 LDLRAD4O15165 306 aa12.52□□□□□ -0.4
LIMS2-213ENST00000469300 LEPROTL1O95214 131 aa12.52□□□□□ -0.4
LIMS2-213ENST00000469300 FHITP49789 147 aa12.52□□□□□ -0.4
LIMS2-213ENST00000469300 IGF2-ASQ6U949 168 aa12.52□□□□□ -0.4
LIMS2-213ENST00000469300 ERASQ7Z444 233 aa12.52□□□□□ -0.4
LIMS2-213ENST00000469300 RAB37Q96AX2 223 aa12.52□□□□□ -0.4
LIMS2-213ENST00000469300 MRPL18Q9H0U6 180 aaKnown RBP12.52□□□□□ -0.4
LIMS2-213ENST00000469300 FRMPD3Q5JV73 1810 aa12.52□□□□□ -0.4
LIMS2-213ENST00000469300 SNRPCP09234 159 aaKnown RBP12.52□□□□□ -0.41
LIMS2-213ENST00000469300 AGAP20933 346 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 TWIST1Q15672 202 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 LRTM2Q8N967 370 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 GPR82Q96P67 336 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 PHLDA3Q9Y5J5 127 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 DPRXA6NFQ7 191 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 WNT2P09544 360 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 CRYBB3P26998 211 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 PVRIGQ6DKI7 326 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 SSC4DQ8WTU2 575 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 C18orf12Q96KH6 178 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 PMCHL2Q9BQD1 86 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 FOXA2Q9Y261 457 aaPredicted RBP12.52□□□□□ -0.41
LIMS2-213ENST00000469300 DOCK9Q9BZ29 2069 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 NOTCH4Q99466 2003 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 PKDREJQ9NTG1 2253 aa12.52□□□□□ -0.41
LIMS2-213ENST00000469300 FAM166AQ6J272 317 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 RCC1LQ96I51 464 aaKnown RBP12.51□□□□□ -0.41
LIMS2-213ENST00000469300 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 ANOS1P23352 680 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 GPR183P32249 361 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 TMEM155Q4W5P6 130 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 GFI1Q99684 422 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 NAPSAO96009 420 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-213ENST00000469300 OR52E5Q8NH55 327 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 AP5S1Q9NUS5 200 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 PLXNA4Q9HCM2 1894 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 IGHV3-48P01763 117 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 RELBQ01201 579 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 ADIPOQQ15848 244 aa12.51□□□□□ -0.41
LIMS2-213ENST00000469300 RSPO3Q9BXY4 272 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-213ENST00000469300 PHF3Q92576 2039 aaKnown RBP12.51□□□□□ -0.41
LIMS2-213ENST00000469300 A0A0A6YYD4 124 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 TIMM23O14925 209 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 VENTXO95231 258 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 PRCDQ00LT1 54 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 HLA-DRB1P01911 266 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 IGHV1-8P0DP01 117 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 GCSHP23434 173 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 MAJINQ3KP22 176 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 SH3BGRL3Q9H299 93 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 HEATR1Q9H583 2144 aaKnown RBP12.5□□□□□ -0.41
LIMS2-213ENST00000469300 LOC107984156A0A0G2JMH3 177 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 OR9G9P0C7N8 305 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 VDAC2P45880 294 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-213ENST00000469300 GOLT1AQ6ZVE7 132 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 ARL17AQ8IVW1 177 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 ZNF257Q9Y2Q1 563 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 MPDZO75970 2070 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 IGHV3-35A0A0C4DH35 117 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 IGFBP2P18065 325 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms