RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 F11RQ9Y624 299 aaKnown RBP15.06■□□□□ 0
SMC4-209ENST00000468653 VPS13CQ709C8 3753 aa15.06■□□□□ 0
SMC4-209ENST00000468653 NAV3Q8IVL0 2385 aa15.06■□□□□ 0
SMC4-209ENST00000468653 A0A1B0GV50 99 aa15.06■□□□□ 0
SMC4-209ENST00000468653 RAB2AP61019 212 aa15.06■□□□□ 0
SMC4-209ENST00000468653 SSX3Q99909 188 aa15.06■□□□□ 0
SMC4-209ENST00000468653 GGTLC1Q9BX51 225 aa15.06■□□□□ 0
SMC4-209ENST00000468653 KCNIP2Q9NS61 270 aa15.06■□□□□ 0
SMC4-209ENST00000468653 SOX21Q9Y651 276 aaPredicted RBP15.06■□□□□ 0
SMC4-209ENST00000468653 CSMD2Q7Z408 3487 aa15.05■□□□□ -0
SMC4-209ENST00000468653 SOX15O60248 233 aa15.05■□□□□ -0
SMC4-209ENST00000468653 C19orf35Q6ZS72 473 aa15.05■□□□□ -0
SMC4-209ENST00000468653 SFT2D1Q8WV19 159 aa15.05■□□□□ -0
SMC4-209ENST00000468653 FNDC4Q9H6D8 234 aaPredicted RBP15.05■□□□□ -0
SMC4-209ENST00000468653 CORTO00230 105 aa15.04■□□□□ -0
SMC4-209ENST00000468653 HLA-DRB1P01911 266 aa15.04■□□□□ -0
SMC4-209ENST00000468653 DEFA4P12838 97 aa15.04■□□□□ -0
SMC4-209ENST00000468653 MFAP2P55001 183 aa15.04■□□□□ -0
SMC4-209ENST00000468653 ACOT6Q3I5F7 207 aaPredicted RBP15.04■□□□□ -0
SMC4-209ENST00000468653 CYB5R2Q6BCY4 276 aa15.04■□□□□ -0
SMC4-209ENST00000468653 PVRIGQ6DKI7 326 aa15.04■□□□□ -0
SMC4-209ENST00000468653 ETFRF1Q6IPR1 90 aa15.04■□□□□ -0
SMC4-209ENST00000468653 UQCC3Q6UW78 93 aa15.04■□□□□ -0
SMC4-209ENST00000468653 COMMD1Q8N668 190 aa15.04■□□□□ -0
SMC4-209ENST00000468653 OR10G4Q8NGN3 311 aa15.04■□□□□ -0
SMC4-209ENST00000468653 OR10G9Q8NGN4 311 aa15.04■□□□□ -0
SMC4-209ENST00000468653 OR10G7Q8NGN6 311 aa15.04■□□□□ -0
SMC4-209ENST00000468653 OR2T6Q8NHC8 308 aa15.04■□□□□ -0
SMC4-209ENST00000468653 ACY3Q96HD9 319 aa15.04■□□□□ -0
SMC4-209ENST00000468653 CR1P17927 2039 aa15.04■□□□□ -0
SMC4-209ENST00000468653 HBE1P02100 147 aa15.03■□□□□ -0
SMC4-209ENST00000468653 TOR2AQ5JU69 321 aa15.03■□□□□ -0
SMC4-209ENST00000468653 LFNGQ8NES3 379 aa15.03■□□□□ -0
SMC4-209ENST00000468653 WFDC11Q8NEX6 87 aa15.03■□□□□ -0
SMC4-209ENST00000468653 PIFOQ8TCI5 191 aa15.03■□□□□ -0
SMC4-209ENST00000468653 RCC1LQ96I51 464 aaKnown RBP15.03■□□□□ -0
SMC4-209ENST00000468653 RBM14Q96PK6 669 aaKnown RBP15.03■□□□□ -0
SMC4-209ENST00000468653 SLC25A33Q9BSK2 321 aa15.03■□□□□ -0
SMC4-209ENST00000468653 WNT10AQ9GZT5 417 aa15.03■□□□□ -0
SMC4-209ENST00000468653 PXMP4Q9Y6I8 212 aa15.03■□□□□ -0
SMC4-209ENST00000468653 IGHV7-81A0A0B4J1V7 117 aa15.03■□□□□ -0
SMC4-209ENST00000468653 CTRB1P17538 263 aa15.03■□□□□ -0
SMC4-209ENST00000468653 M6PRP20645 277 aa15.03■□□□□ -0
SMC4-209ENST00000468653 BPIFB3P59826 476 aa15.03■□□□□ -0
SMC4-209ENST00000468653 NDPQ00604 133 aa15.03■□□□□ -0
SMC4-209ENST00000468653 MIC13Q5XKP0 118 aa15.03■□□□□ -0
SMC4-209ENST00000468653 CTRB2Q6GPI1 263 aa15.03■□□□□ -0
SMC4-209ENST00000468653 TMEM219Q86XT9 240 aa15.03■□□□□ -0
SMC4-209ENST00000468653 BTBD17A6NE02 478 aa15.02□□□□□ -0.01
SMC4-209ENST00000468653 IGHV3-48P01763 117 aa15.02□□□□□ -0.01
SMC4-209ENST00000468653 ZNF726P1Q15940 193 aa15.02□□□□□ -0.01
SMC4-209ENST00000468653 RPP25LQ8N5L8 163 aaKnown RBP15.02□□□□□ -0.01
SMC4-209ENST00000468653 NARS2Q96I59 477 aaKnown RBP15.02□□□□□ -0.01
SMC4-209ENST00000468653 SLC39A9Q9NUM3 307 aa15.02□□□□□ -0.01
SMC4-209ENST00000468653 MOB4Q9Y3A3 225 aa15.02□□□□□ -0.01
SMC4-209ENST00000468653 GCN1Q92616 2671 aaKnown RBP15.01□□□□□ -0.01
SMC4-209ENST00000468653 H3BUX3 64 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 RPL29P47914 159 aaKnown RBP15.01□□□□□ -0.01
SMC4-209ENST00000468653 SPSB3Q6PJ21 355 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 LCN15Q6UWW0 184 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 BPIFCQ8NFQ6 507 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 OR1L6Q8NGR2 347 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 NPIPB3Q92617 1050 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 ACTR3CQ9C0K3 210 aaPredicted RBP15.01□□□□□ -0.01
SMC4-209ENST00000468653 TREM1Q9NP99 234 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 PRRC2AP48634 2157 aaKnown RBP15.01□□□□□ -0.01
SMC4-209ENST00000468653 ABCA1O95477 2261 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 CYB5BO43169 146 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 TSPAN9O75954 239 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 OR10J1P30954 320 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 B2MP61769 119 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 SRSF3P84103 164 aaKnown RBP15.01□□□□□ -0.01
SMC4-209ENST00000468653 FAM122CQ6P4D5 195 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 STPG3Q8N7X2 389 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 C5orf56Q8N8D9 126 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 NANPQ8TBE9 248 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 MBD3L1Q8WWY6 194 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 C22orf15Q8WYQ4 148 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 HSPB9Q9BQS6 159 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 TMEM231Q9H6L2 316 aa15.01□□□□□ -0.01
SMC4-209ENST00000468653 IGKV1OR2-108A0A075B7D4 117 aa15□□□□□ -0.01
SMC4-209ENST00000468653 TRAV1-1A0A0B4J248 108 aa15□□□□□ -0.01
SMC4-209ENST00000468653 NPIPB5A8MRT5 1133 aa15□□□□□ -0.01
SMC4-209ENST00000468653 MT-CO2P00403 227 aa15□□□□□ -0.01
SMC4-209ENST00000468653 RND2P52198 227 aa15□□□□□ -0.01
SMC4-209ENST00000468653 CCL20P78556 96 aa15□□□□□ -0.01
SMC4-209ENST00000468653 LY6EQ16553 131 aa15□□□□□ -0.01
SMC4-209ENST00000468653 FOXC2Q99958 501 aa15□□□□□ -0.01
SMC4-209ENST00000468653 SLC25A22Q9H936 323 aa15□□□□□ -0.01
SMC4-209ENST00000468653 SLC45A2Q9UMX9 530 aa15□□□□□ -0.01
SMC4-209ENST00000468653 DMRT1Q9Y5R6 373 aa15□□□□□ -0.01
SMC4-209ENST00000468653 IGHV3-21A0A0B4J1V1 117 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 MAP1LC3B2A6NCE7 125 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 KRBOX1C9JBD0 128 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 YIF1AO95070 293 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 CRYGCP07315 174 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 ASPHD1Q5U4P2 390 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 SSX7Q7RTT5 188 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 TTC9CQ8N5M4 171 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 FAM210AQ96ND0 272 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms