RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 FABP12A6NFH5 140 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 INS-IGF2F8WCM5 200 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 ST8SIA3O43173 380 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 CDS2O95674 445 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 CTSGP08311 255 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 FCGR2BP31994 310 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-207ENST00000468267 SPINK9Q5DT21 86 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 LINC00322Q6ZN03 302 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-207ENST00000468267 DEFB125Q8N687 156 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 OR51S1Q8NGJ8 323 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 RRNAD1Q96FB5 475 aaKnown RBP12.84□□□□□ -0.35
SSBP1-207ENST00000468267 TXN2Q99757 166 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 NAA60Q9H7X0 242 aa12.84□□□□□ -0.35
SSBP1-207ENST00000468267 GAR1Q9NY12 217 aaKnown RBP12.84□□□□□ -0.35
SSBP1-207ENST00000468267 TRAV25A0A0B4J276 109 aa12.83□□□□□ -0.36
SSBP1-207ENST00000468267 A0A0G2JRQ6 117 aa12.83□□□□□ -0.36
SSBP1-207ENST00000468267 TEX13DA0A0J9YY54 714 aaPredicted RBP12.83□□□□□ -0.36
SSBP1-207ENST00000468267 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
SSBP1-207ENST00000468267 IFNA17P01571 189 aa12.83□□□□□ -0.36
SSBP1-207ENST00000468267 OR5AC1P0C628 307 aa12.83□□□□□ -0.36
SSBP1-207ENST00000468267 MFAP4P55083 255 aa12.83□□□□□ -0.36
SSBP1-207ENST00000468267 SLC35G3Q8N808 338 aa12.83□□□□□ -0.36
SSBP1-207ENST00000468267 SPATA25Q9BR10 227 aa12.83□□□□□ -0.36
SSBP1-207ENST00000468267 DAZ1Q9NQZ3 744 aaKnown RBP12.83□□□□□ -0.36
SSBP1-207ENST00000468267 CSMD3Q7Z407 3707 aa12.83□□□□□ -0.36
SSBP1-207ENST00000468267 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
SSBP1-207ENST00000468267 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
SSBP1-207ENST00000468267 CRYM-AS1A6NIL9 109 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 C3orf84H3BNL1 204 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 K7EMT4 169 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 SCAF4O95104 1147 aaKnown RBP12.82□□□□□ -0.36
SSBP1-207ENST00000468267 MT-CO2P00403 227 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
SSBP1-207ENST00000468267 SNCAP37840 140 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 DHODHQ02127 395 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 Q6ZRM9 215 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 RBPMS2Q6ZRY4 209 aaKnown RBP12.82□□□□□ -0.36
SSBP1-207ENST00000468267 SLC16A13Q7RTY0 426 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 FAM219AQ8IW50 185 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 SELENOHQ8IZQ5 122 aaKnown RBP12.82□□□□□ -0.36
SSBP1-207ENST00000468267 RNASE11Q8TAA1 199 aaKnown RBP12.82□□□□□ -0.36
SSBP1-207ENST00000468267 LHFPL5Q8TAF8 219 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 ZNF414Q96IQ9 312 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 PDCD10Q9BUL8 212 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 WFDC10AQ9H1F0 79 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 SCP2D1Q9UJQ7 156 aa12.82□□□□□ -0.36
SSBP1-207ENST00000468267 NUPL2O15504 423 aaKnown RBP12.81□□□□□ -0.36
SSBP1-207ENST00000468267 IGHV3-48P01763 117 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 ETV6P41212 452 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 RELQ04864 619 aaPredicted RBP12.81□□□□□ -0.36
SSBP1-207ENST00000468267 ANKRD55Q3KP44 614 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 AARDQ4LEZ3 155 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 PVRIGQ6DKI7 326 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 OR52B4Q8NGK2 314 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 RBPMSQ93062 196 aaKnown RBP12.81□□□□□ -0.36
SSBP1-207ENST00000468267 PINX1Q96BK5 328 aaKnown RBP12.81□□□□□ -0.36
SSBP1-207ENST00000468267 CITED4Q96RK1 184 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 C20orf24Q9BUV8 137 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 SRD5A3Q9H8P0 318 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 TENM2Q9NT68 2774 aa12.81□□□□□ -0.36
SSBP1-207ENST00000468267 IGHV3OR16-8A0A075B7F1 116 aa12.8□□□□□ -0.36
SSBP1-207ENST00000468267 CCDC160A6NGH7 325 aa12.8□□□□□ -0.36
SSBP1-207ENST00000468267 C15orf62A8K5M9 175 aa12.8□□□□□ -0.36
SSBP1-207ENST00000468267 SUB1P53999 127 aaKnown RBP eCLIP12.8□□□□□ -0.361e-6■■□□□ 12.6
SSBP1-207ENST00000468267 MUC7Q8TAX7 377 aa12.8□□□□□ -0.36
SSBP1-207ENST00000468267 SCGB3A2Q96PL1 93 aa12.8□□□□□ -0.36
SSBP1-207ENST00000468267 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-207ENST00000468267 DYNC2H1Q8NCM8 4307 aaKnown RBP12.79□□□□□ -0.36
SSBP1-207ENST00000468267 ZNF207O43670 478 aaKnown RBP12.79□□□□□ -0.36
SSBP1-207ENST00000468267 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
SSBP1-207ENST00000468267 HOXA1P49639 335 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-207ENST00000468267 SPCS3P61009 180 aa12.79□□□□□ -0.36
SSBP1-207ENST00000468267 RBM38Q9H0Z9 239 aaKnown RBP12.79□□□□□ -0.36
SSBP1-207ENST00000468267 ENY2Q9NPA8 101 aa12.79□□□□□ -0.36
SSBP1-207ENST00000468267 MCUBQ9NWR8 336 aa12.79□□□□□ -0.36
SSBP1-207ENST00000468267 TMEM56-RWDD3S4R434 201 aa12.79□□□□□ -0.36
SSBP1-207ENST00000468267 RYR3Q15413 4870 aa12.79□□□□□ -0.36
SSBP1-207ENST00000468267 TSPAN4O14817 238 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 GNG7O60262 68 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 PYDC2Q56P42 97 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 TMEM268Q5VZI3 342 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 LAMTOR1Q6IAA8 161 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 DUSP18Q8NEJ0 188 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 OR52E5Q8NH55 327 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 TMEM230Q96A57 120 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 GPR146Q96CH1 333 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 GALNT14Q96FL9 552 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 OR10C1Q96KK4 312 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 SPAG8Q99932 426 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-207ENST00000468267 HIPK2Q9H2X6 1198 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 SMPXQ9UHP9 88 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 KCNIP3Q9Y2W7 256 aa12.78□□□□□ -0.36
SSBP1-207ENST00000468267 CORTO00230 105 aa12.77□□□□□ -0.37
SSBP1-207ENST00000468267 YIF1AO95070 293 aa12.77□□□□□ -0.37
SSBP1-207ENST00000468267 NPBWR1P48145 328 aa12.77□□□□□ -0.37
SSBP1-207ENST00000468267 KLF9Q13886 244 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-207ENST00000468267 TMEM187Q14656 261 aa12.77□□□□□ -0.37
SSBP1-207ENST00000468267 BSXQ3C1V8 233 aa12.77□□□□□ -0.37
SSBP1-207ENST00000468267 IL22RA2Q969J5 263 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms