RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ZNF436Q9C0F3 470 aaPredicted RBP11.83□□□□□ -0.52
SNIP1-202ENST00000468040 RCL1Q9Y2P8 373 aaKnown RBP11.83□□□□□ -0.52
SNIP1-202ENST00000468040 LSM5Q9Y4Y9 91 aaKnown RBP11.83□□□□□ -0.52
SNIP1-202ENST00000468040 DMRT1Q9Y5R6 373 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 RLN2P04090 185 aa11.82□□□□□ -0.52
SNIP1-202ENST00000468040 GIPP09681 153 aaPredicted RBP11.82□□□□□ -0.52
SNIP1-202ENST00000468040 PET100P0DJ07 73 aa11.82□□□□□ -0.52
SNIP1-202ENST00000468040 EXOSC2Q13868 293 aaKnown RBP11.82□□□□□ -0.52
SNIP1-202ENST00000468040 LRRC37A5PQ49AS3 106 aa11.82□□□□□ -0.52
SNIP1-202ENST00000468040 FAM209BQ5JX69 171 aa11.82□□□□□ -0.52
SNIP1-202ENST00000468040 SPANXN5Q5MJ07 72 aa11.82□□□□□ -0.52
SNIP1-202ENST00000468040 C11orf87Q6NUJ2 197 aa11.82□□□□□ -0.52
SNIP1-202ENST00000468040 RNASEH2CQ8TDP1 164 aaKnown RBP11.82□□□□□ -0.52
SNIP1-202ENST00000468040 PPP1R1CQ8WVI7 109 aa11.82□□□□□ -0.52
SNIP1-202ENST00000468040 MISP3Q96FF7 219 aa11.82□□□□□ -0.52
SNIP1-202ENST00000468040 PSENENQ9NZ42 101 aa11.82□□□□□ -0.52
SNIP1-202ENST00000468040 STRAPQ9Y3F4 350 aaKnown RBP11.82□□□□□ -0.52
SNIP1-202ENST00000468040 NUDT19A8MXV4 375 aa11.81□□□□□ -0.52
SNIP1-202ENST00000468040 TSC22D2O75157 780 aa11.81□□□□□ -0.52
SNIP1-202ENST00000468040 DEDDO75618 318 aa11.81□□□□□ -0.52
SNIP1-202ENST00000468040 NDUFB8O95169 186 aa11.81□□□□□ -0.52
SNIP1-202ENST00000468040 RAB11AP62491 216 aa11.81□□□□□ -0.52
SNIP1-202ENST00000468040 KLHL30-AS1Q8NEE0 82 aa11.81□□□□□ -0.52
SNIP1-202ENST00000468040 VN1R17PQ8TDU5 208 aa11.81□□□□□ -0.52
SNIP1-202ENST00000468040 C4orf3Q8WVX3 66 aa11.81□□□□□ -0.52
SNIP1-202ENST00000468040 EEF1AKMT3Q96AZ1 226 aa11.81□□□□□ -0.52
SNIP1-202ENST00000468040 RPS10-NUDT3A0A1W2PQS6 291 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 C15orf62A8K5M9 175 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 H3BP45 60 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 TMEM50AO95807 157 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 IFNA4P05014 189 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 OR8U8P0C7N1 319 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 OPRK1P41145 380 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 PAX9P55771 341 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 RAP2BP61225 183 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 DEFA5Q01523 94 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 TMEM170AQ8WVE7 144 aa11.8□□□□□ -0.52
SNIP1-202ENST00000468040 PINX1Q96BK5 328 aaKnown RBP11.8□□□□□ -0.52
SNIP1-202ENST00000468040 TRBV7-1A0A0A6YYK4 115 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 A0A1W2PRX2 142 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 I3L2K1 104 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 K7EIM0 57 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 MT-CO2P00403 227 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 LGALS1P09382 135 aaKnown RBP11.79□□□□□ -0.52
SNIP1-202ENST00000468040 RUNX1Q01196 453 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 FGL1Q08830 312 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 ETFRF1Q6IPR1 90 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 ZNF343Q6P1L6 599 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 SCARB1Q8WTV0 552 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 WDR89Q96FK6 387 aaPredicted RBP11.79□□□□□ -0.52
SNIP1-202ENST00000468040 OR4C12Q96R67 309 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 GNB4Q9HAV0 340 aa11.79□□□□□ -0.52
SNIP1-202ENST00000468040 PAIP2BQ9ULR5 123 aaKnown RBP11.79□□□□□ -0.52
SNIP1-202ENST00000468040 MFSD2BA6NFX1 497 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 ADARB2-AS1A8MUL3 147 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 E5RGE8 158 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 SCAF4O95104 1147 aaKnown RBP11.78□□□□□ -0.52
SNIP1-202ENST00000468040 MPC2O95563 127 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 IGHV3-11P01762 117 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 BCAP31P51572 246 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 CAV2P51636 162 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 NSUN5P1Q3KNT7 163 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 HIST2H2BDQ6DRA6 164 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 PRSS54Q6PEW0 395 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 ETV3LQ6ZN32 361 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 SPATA3Q8NHX4 192 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 OR5B12Q96R08 314 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 ATP6V0BQ99437 205 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 C11orf1Q9H5F2 150 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 LYRM2Q9NU23 88 aaPredicted RBP11.78□□□□□ -0.52
SNIP1-202ENST00000468040 GAR1Q9NY12 217 aaKnown RBP11.78□□□□□ -0.52
SNIP1-202ENST00000468040 C21orf62Q9NYP8 219 aa11.78□□□□□ -0.52
SNIP1-202ENST00000468040 hCG_2014768A0A024R1R8 64 aa11.77□□□□□ -0.53
SNIP1-202ENST00000468040 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.53
SNIP1-202ENST00000468040 I3L521 148 aa11.77□□□□□ -0.53
SNIP1-202ENST00000468040 SLC25A4P12235 298 aa11.77□□□□□ -0.53
SNIP1-202ENST00000468040 TMEM14EPQ6UXP3 125 aa11.77□□□□□ -0.53
SNIP1-202ENST00000468040 OR4F17Q8NGA8 305 aa11.77□□□□□ -0.53
SNIP1-202ENST00000468040 THAP6Q8TBB0 222 aa11.77□□□□□ -0.53
SNIP1-202ENST00000468040 ZNF502Q8TBZ5 544 aa11.77□□□□□ -0.53
SNIP1-202ENST00000468040 OR4F4Q96R69 305 aa11.77□□□□□ -0.53
SNIP1-202ENST00000468040 OR5AC2Q9NZP5 309 aa11.77□□□□□ -0.53
SNIP1-202ENST00000468040 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 IGHV3-21A0A0B4J1V1 117 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 H0YIZ8 118 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 M0QZ24 198 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 METTL15P1P0C7V9 234 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 FCGR2BP31994 310 aaPredicted RBP11.76□□□□□ -0.53
SNIP1-202ENST00000468040 GPX4P36969 197 aaPredicted RBP11.76□□□□□ -0.53
SNIP1-202ENST00000468040 P2RY1P47900 373 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 MFAP4P55083 255 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 CD69Q07108 199 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 C18orf65Q6ZTR6 163 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 OR2T35Q8NGX2 323 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 CHAC2Q8WUX2 184 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 TXN2Q99757 166 aa11.76□□□□□ -0.53
SNIP1-202ENST00000468040 FNDC4Q9H6D8 234 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms