RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ZNF709Q8N972 641 aa7.84□□□□□ -1.15
VPS26A-204ENST00000467852 TCTEX1D2Q8WW35 142 aa7.84□□□□□ -1.15
VPS26A-204ENST00000467852 METTL26Q96S19 204 aa7.84□□□□□ -1.15
VPS26A-204ENST00000467852 CABLES2Q9BTV7 478 aa7.84□□□□□ -1.15
VPS26A-204ENST00000467852 SEPSECSQ9HD40 501 aaKnown RBP7.84□□□□□ -1.15
VPS26A-204ENST00000467852 PSCAO43653 123 aa7.83□□□□□ -1.16
VPS26A-204ENST00000467852 DIRAS3O95661 229 aa7.83□□□□□ -1.16
VPS26A-204ENST00000467852 HOXB6P17509 224 aaKnown RBP7.83□□□□□ -1.16
VPS26A-204ENST00000467852 NKX2-1P43699 371 aaPredicted RBP7.83□□□□□ -1.16
VPS26A-204ENST00000467852 CCDC58Q4VC31 144 aa7.83□□□□□ -1.16
VPS26A-204ENST00000467852 ADGRG5Q8IZF4 528 aa7.83□□□□□ -1.16
VPS26A-204ENST00000467852 Q8N814 137 aa7.83□□□□□ -1.16
VPS26A-204ENST00000467852 OR4B1Q8NGF8 309 aa7.83□□□□□ -1.16
VPS26A-204ENST00000467852 HSD17B10Q99714 261 aaKnown RBP7.83□□□□□ -1.16
VPS26A-204ENST00000467852 CRCT1Q9UGL9 99 aa7.83□□□□□ -1.16
VPS26A-204ENST00000467852 RBMX2Q9Y388 322 aaKnown RBP7.83□□□□□ -1.16
VPS26A-204ENST00000467852 A0A1W2PPK0 400 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 SNTNA6NMZ2 147 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 ZNF705GA8MUZ8 300 aaPredicted RBP7.82□□□□□ -1.16
VPS26A-204ENST00000467852 FAM90A26D6RGX4 464 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 H3BNG1 76 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 J3QRK9 145 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 UPK2O00526 184 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 SLC22A5O76082 557 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 NXPH4O95158 308 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 CRYBB3P26998 211 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 RPL37AP61513 92 aaKnown RBP7.82□□□□□ -1.16
VPS26A-204ENST00000467852 MRPS15P82914 257 aaKnown RBP7.82□□□□□ -1.16
VPS26A-204ENST00000467852 PSG9Q00887 426 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 MS4A2Q01362 244 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 MLANAQ16655 118 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 Q499Y3 187 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 NKAIN3Q8N8D7 197 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 CANT1Q8WVQ1 401 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 LGALS12Q96DT0 336 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 SLC35B3Q9H1N7 401 aa7.82□□□□□ -1.16
VPS26A-204ENST00000467852 TRBV5-5A0A0J9YX44 114 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 DBX1A6NMT0 343 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 ZNF701M0R085 212 aaPredicted RBP7.81□□□□□ -1.16
VPS26A-204ENST00000467852 SOCS1O15524 211 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
VPS26A-204ENST00000467852 GDF5OSQ5U4N7 250 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 CMTM1Q8IZ96 169 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 CADM3Q8N126 398 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 OR1L8Q8NGR8 309 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 OR13F1Q8NGS4 319 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 OR10J6PQ8NGY7 276 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 LSM10Q969L4 123 aaKnown RBP7.81□□□□□ -1.16
VPS26A-204ENST00000467852 GPHA2Q96T91 129 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 HINT2Q9BX68 163 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 DNAJC4Q9NNZ3 241 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 SPATA2Q9UM82 520 aa7.81□□□□□ -1.16
VPS26A-204ENST00000467852 FSIP2Q5CZC0 6907 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 A0A0A6YYD4 124 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 TEX50A0A1B0GTY4 177 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 LRCOL1A6NCL2 159 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 HMGB1P1B2RPK0 211 aaPredicted RBP7.8□□□□□ -1.16
VPS26A-204ENST00000467852 I3L2K1 104 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 PRM2P04554 102 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 FGF2P09038 288 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 CD37P11049 281 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 TSPOP30536 169 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 GYS2P54840 703 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 BRWD1-AS2P59051 145 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 ACOT6Q3I5F7 207 aaPredicted RBP7.8□□□□□ -1.16
VPS26A-204ENST00000467852 ACSM3Q53FZ2 586 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 MEDAGQ5VYS4 303 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 Q6ZRU5 148 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 H1FOOQ8IZA3 346 aaPredicted RBP7.8□□□□□ -1.16
VPS26A-204ENST00000467852 PQLC1Q8N2U9 271 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 TRUB1Q8WWH5 349 aaKnown RBP7.8□□□□□ -1.16
VPS26A-204ENST00000467852 DAZAP1Q96EP5 407 aaKnown RBP7.8□□□□□ -1.16
VPS26A-204ENST00000467852 URM1Q9BTM9 101 aaKnown RBP7.8□□□□□ -1.16
VPS26A-204ENST00000467852 CENPOQ9BU64 300 aa7.8□□□□□ -1.16
VPS26A-204ENST00000467852 SAV1Q9H4B6 383 aaPredicted RBP7.8□□□□□ -1.16
VPS26A-204ENST00000467852 A0A1B0GU03 582 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 K7EP13 123 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 MT-CO2P00403 227 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 IGHV3-48P01763 117 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 CDK1P06493 297 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 NPBWR1P48145 328 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 B2MP61769 119 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 UNC119Q13432 240 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 KDM4DQ6B0I6 523 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 XAF1Q6GPH4 301 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 FOXI2Q6ZQN5 318 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 OR1P1Q8NH06 330 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 RBPMSQ93062 196 aaKnown RBP7.79□□□□□ -1.16
VPS26A-204ENST00000467852 ABHD1Q96SE0 405 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 SLC29A1Q99808 456 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 SCPEP1Q9HB40 452 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 NRN1Q9NPD7 142 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 LY96Q9Y6Y9 160 aa7.79□□□□□ -1.16
VPS26A-204ENST00000467852 DENRO43583 198 aaKnown RBP7.78□□□□□ -1.16
VPS26A-204ENST00000467852 ADAP1O75689 374 aa7.78□□□□□ -1.16
VPS26A-204ENST00000467852 IGLV2-8P01709 118 aa7.78□□□□□ -1.16
VPS26A-204ENST00000467852 SPATA31B1PQ5VZV4 182 aa7.78□□□□□ -1.16
VPS26A-204ENST00000467852 SMIM19Q96E16 107 aa7.78□□□□□ -1.16
VPS26A-204ENST00000467852 ARHGAP5-AS1Q96IT6 56 aa7.78□□□□□ -1.16
VPS26A-204ENST00000467852 IGF2BP2-AS1Q96M15 143 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms