RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 THTPAQ9BU02 230 aa2.88□□□□□ -1.95
SSR3-204ENST00000467733 YTHDF1Q9BYJ9 559 aaKnown RBP2.88□□□□□ -1.95
SSR3-204ENST00000467733 SELENOIQ9C0D9 397 aa2.88□□□□□ -1.95
SSR3-204ENST00000467733 RIBC2Q9H4K1 309 aa2.88□□□□□ -1.95
SSR3-204ENST00000467733 BANF2Q9H503 90 aa2.88□□□□□ -1.95
SSR3-204ENST00000467733 SMPD3Q9NY59 655 aaPredicted RBP2.88□□□□□ -1.95
SSR3-204ENST00000467733 TBC1D24Q9ULP9 559 aa2.88□□□□□ -1.95
SSR3-204ENST00000467733 TMED3Q9Y3Q3 217 aa2.88□□□□□ -1.95
SSR3-204ENST00000467733 LRP2P98164 4655 aa2.88□□□□□ -1.95
SSR3-204ENST00000467733 RNF213Q63HN8 5207 aa2.88□□□□□ -1.95
SSR3-204ENST00000467733 LRP1Q07954 4544 aaKnown RBP2.88□□□□□ -1.95
SSR3-204ENST00000467733 IGLV11-55A0A075B6I3 123 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 TRBV6-6A0A0A6YYG2 114 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 TEX48A0A1B0GUV7 120 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 H7C423 109 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 K7EMT4 169 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 NDUFA4O00483 81 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 CRTAPO75718 401 aaPredicted RBP2.87□□□□□ -1.95
SSR3-204ENST00000467733 CRYZL1O95825 349 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 CRYGCP07315 174 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 SPP1P10451 314 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 AREGP15514 252 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 CEACAM6P40199 344 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 RPL27AP46776 148 aaKnown RBP2.87□□□□□ -1.95
SSR3-204ENST00000467733 TFPI2P48307 235 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 SNRPGP62308 76 aaKnown RBP2.87□□□□□ -1.95
SSR3-204ENST00000467733 MRPL28Q13084 256 aaKnown RBP2.87□□□□□ -1.95
SSR3-204ENST00000467733 TPBGQ13641 420 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 PHLDA2Q53GA4 152 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 CFAP161Q6P656 301 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 GLIPR1L1Q6UWM5 242 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 SSX9Q7RTT3 188 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 STHQ8IWL8 128 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 ACBD7Q8N6N7 88 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 C15orf53Q8NAA6 179 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 CSNK1G2-AS1Q8NCQ2 148 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 OR8J1Q8NGP2 316 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 ZNRF2Q8NHG8 242 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 GPR148Q8TDV2 347 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 NRBF2Q96F24 287 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 C5orf30Q96GV9 206 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 ADTRPQ96IZ2 230 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 MYCBPQ99417 103 aaPredicted RBP2.87□□□□□ -1.95
SSR3-204ENST00000467733 RNF2Q99496 336 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 ATG101Q9BSB4 218 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 OR2D2Q9H210 308 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 TMEM14BQ9NUH8 114 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 IMPAD1Q9NX62 359 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 MGAT4AQ9UM21 535 aa2.87□□□□□ -1.95
SSR3-204ENST00000467733 TRAV2A0A0B4J234 112 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 IGKV1-6A0A0C4DH72 117 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 IGHV7-4-1A0A0J9YVY3 117 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 OR2T8A6NH00 312 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 CHEK1O14757 476 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 ZNF207O43670 478 aaKnown RBP2.86□□□□□ -1.95
SSR3-204ENST00000467733 ZNF735P0CB33 412 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 SMIM18P0DKX4 95 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 DEFA4P12838 97 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 RPA2P15927 270 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 IGFBP3P17936 291 aaPredicted RBP2.86□□□□□ -1.95
SSR3-204ENST00000467733 PTBP1P26599 531 aaKnown RBP eCLIP2.86□□□□□ -1.95
SSR3-204ENST00000467733 PAX9P55771 341 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 DEFB131AP59861 70 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 MS4A2Q01362 244 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 TTC32Q5I0X7 151 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 LEMD1Q68G75 181 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 C6orf201Q7Z4U5 140 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 HOGA1Q86XE5 327 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 JAGN1Q8N5M9 183 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 OR11H4Q8NGC9 324 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 OR10G8Q8NGN5 311 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 SETD6Q8TBK2 473 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 CANT1Q8WVQ1 401 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 GIMAP1Q8WWP7 306 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 BSCL2Q96G97 398 aaPredicted RBP2.86□□□□□ -1.95
SSR3-204ENST00000467733 NEDD4LQ96PU5 975 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 ATP6V0BQ99437 205 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 FAAP24Q9BTP7 215 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 C20orf24Q9BUV8 137 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 SDHAF2Q9NX18 166 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 RDH8Q9NYR8 311 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 SMPXQ9UHP9 88 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 FAT3Q8TDW7 4589 aa2.86□□□□□ -1.95
SSR3-204ENST00000467733 IGKV3-7A0A075B6H7 116 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 TRAV8-7A0A075B6U6 113 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 IGHV3OR16-8A0A075B7F1 116 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 TRBV5-5A0A0J9YX44 114 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 TMEM189A5PLL7 270 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 E7EUB6 86 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 KBTBD11O94819 623 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 SMR3BP02814 79 aaPredicted RBP2.85□□□□□ -1.95
SSR3-204ENST00000467733 REG1AP05451 166 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 CD5P06127 495 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 SPART-AS1P0CW21 52 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 HTN3P15516 51 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 SRMP19623 302 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 DUTP33316 252 aaKnown RBP2.85□□□□□ -1.95
SSR3-204ENST00000467733 MAS1LP35410 378 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 PSMD7P51665 324 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 GBX2P52951 348 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms