RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 SPRNQ5BIV9 151 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 SPINK9Q5DT21 86 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 GCSAMLQ5JQS6 135 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 TMEM200BQ69YZ2 307 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 VHLLQ6RSH7 139 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 C1orf229Q6ZS94 237 aaPredicted RBP5.56□□□□□ -1.52
CDHR3-204ENST00000466351 TGIF2LXQ8IUE1 241 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 RPRMLQ8N4K4 120 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 TMEM116Q8NCL8 245 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 OR1L6Q8NGR2 347 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 WIPF2Q8TF74 440 aaPredicted RBP5.56□□□□□ -1.52
CDHR3-204ENST00000466351 SSMEM1Q8WWF3 244 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 RND1Q92730 232 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 TRGV9Q99603 122 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 ELOVL1Q9BW60 279 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 MRPL20Q9BYC9 149 aaKnown RBP5.56□□□□□ -1.52
CDHR3-204ENST00000466351 RNF24Q9Y225 148 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 YTHDF2Q9Y5A9 579 aaKnown RBP5.56□□□□□ -1.52
CDHR3-204ENST00000466351 TRAPPC1Q9Y5R8 145 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 SOX21Q9Y651 276 aaPredicted RBP5.56□□□□□ -1.52
CDHR3-204ENST00000466351 ANKRD11Q6UB99 2663 aaPredicted RBP5.56□□□□□ -1.52
CDHR3-204ENST00000466351 GVINP1Q7Z2Y8 2422 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 NAV3Q8IVL0 2385 aa5.56□□□□□ -1.52
CDHR3-204ENST00000466351 WDFY4Q6ZS81 3184 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 RIF1Q5UIP0 2472 aaKnown RBP5.55□□□□□ -1.52
CDHR3-204ENST00000466351 CEP250Q9BV73 2442 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 IGKV1OR2-108A0A075B7D4 117 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 HELTA6NFD8 242 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 SRRM4A7MD48 611 aaKnown RBP5.55□□□□□ -1.52
CDHR3-204ENST00000466351 SHISA9B4DS77 424 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 IGLV2-23P01705 113 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 REG1AP05451 166 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 IGHV1-8P0DP01 117 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 GZMBP10144 247 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 OR10J1P30954 320 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 APOBEC3AP31941 199 aaPredicted RBP5.55□□□□□ -1.52
CDHR3-204ENST00000466351 CA7P43166 264 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 PRRX1P54821 245 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 UBE2G2P60604 165 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 CX3CL1P78423 397 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 CCL8P80075 99 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 HOXA4Q00056 320 aaPredicted RBP5.55□□□□□ -1.52
CDHR3-204ENST00000466351 CT83Q5H943 113 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 OR10J3Q5JRS4 329 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 TOMM20LQ6UXN7 152 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 GFRALQ6UXV0 394 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 ATP5L2Q7Z4Y8 100 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 S100A7AQ86SG5 101 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 Q8NA96 180 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 PRSS33Q8NF86 280 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 OCC1Q8TAD7 63 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 LRFN3Q9BTN0 628 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 DERL1Q9BUN8 251 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 TMEM133Q9H2Q1 129 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 DNAJC4Q9NNZ3 241 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 DYNLRB1Q9NP97 96 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 ZMAT5Q9UDW3 170 aaKnown RBP5.55□□□□□ -1.52
CDHR3-204ENST00000466351 V9GYV3 84 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 FRYQ5TBA9 3013 aa5.55□□□□□ -1.52
CDHR3-204ENST00000466351 MUC3AQ02505 3323 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 ANKHD1Q8IWZ3 2542 aaKnown RBP5.54□□□□□ -1.52
CDHR3-204ENST00000466351 MAP1BP46821 2468 aaKnown RBP5.54□□□□□ -1.52
CDHR3-204ENST00000466351 IGHV1-69-2A0A0G2JMI3 117 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 TRBV6-1A0A0K0K1D8 114 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 A0A0U1RQK1 487 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 SMIM27A0A1W2PRY6 76 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 ZNF320A2RRD8 509 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 FAM231BA6NCW3 169 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 GGTLC3B5MD39 225 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 J3QL48 77 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 K7EN84 100 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 COX7A2P2O60397 106 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 OR7C2O60412 319 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 MMP23AO75900 390 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 IGLV1-47P01700 117 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 CD3EP07766 207 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 DDTP30046 118 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 TPPP2P59282 170 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 UBE2L3P68036 154 aaKnown RBP5.54□□□□□ -1.52
CDHR3-204ENST00000466351 ZNF90Q03938 601 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 CENPWQ5EE01 88 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 FAM209BQ5JX69 171 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 FAM201AQ5SY85 155 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 FAM162BQ5T6X4 162 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 GFI1BQ5VTD9 330 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 MIR17HGQ75NE6 70 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 REC114Q7Z4M0 266 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 WFDC8Q8IUA0 241 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 ZCCHC24Q8N2G6 241 aaKnown RBP5.54□□□□□ -1.52
CDHR3-204ENST00000466351 ARL6IP6Q8N6S5 226 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 NECAP1Q8NC96 275 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 LEAP2Q969E1 77 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 ZNF503Q96F45 646 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 PERPQ96FX8 193 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 ABHD17AQ96GS6 310 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 FAM167A-AS1Q96KT0 104 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 IGF2BP2-AS1Q96M15 143 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 NDUFAF3Q9BU61 184 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 KLF12Q9Y4X4 402 aa5.54□□□□□ -1.52
CDHR3-204ENST00000466351 DSPP15924 2871 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms