RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 RAB5CP51148 216 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 ZNF616Q08AN1 781 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 KIAA0141Q14154 515 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 LRRC37A5PQ49AS3 106 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 C19orf35Q6ZS72 473 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 WFDC9Q8NEX5 89 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 OR1N2Q8NGR9 330 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 MYOZ3Q8TDC0 251 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 SEC22AQ96IW7 307 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 RHOVQ96L33 236 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 RTBDNQ9BSG5 229 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 AURKAIP1Q9NWT8 199 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 NSG2Q9Y328 171 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 TMED3Q9Y3Q3 217 aa7.55□□□□□ -1.2
RTFDC1-205ENST00000466260 TRAV3A0A0B4J244 114 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 E7EUB6 86 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 LINC01619G3V211 115 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 K7EPK0 472 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 PGLYRP1O75594 196 aaPredicted RBP7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 CDS2O95674 445 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 HPRT1P00492 218 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 REG1AP05451 166 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 LGALS1P09382 135 aaKnown RBP7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 PI3P19957 117 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 LPAR6P43657 344 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 RND3P61587 244 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 MSMO1Q15800 293 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 IAH1Q2TAA2 248 aaPredicted RBP7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 OR4A47Q6IF82 309 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 TBC1D26Q86UD7 250 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 CMTM1Q8IZ96 169 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 PUSL1Q8N0Z8 303 aaKnown RBP7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 SVBPQ8N300 66 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 VSTM2AQ8TAG5 236 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 MRAPQ8TCY5 172 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 IL22RA2Q969J5 263 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 TMEM230Q96A57 120 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 NAA60Q9H7X0 242 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 TMEM140Q9NV12 185 aa7.54□□□□□ -1.2
RTFDC1-205ENST00000466260 SEC14L6B5MCN3 397 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 CCSO14618 274 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 OR2J3O76001 311 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 OR8U8P0C7N1 319 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 OR9G9P0C7N8 305 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 NQO2P16083 231 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 G6PCP35575 357 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 ERVK-16P61578 105 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 RPL8P62917 257 aaKnown RBP7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 LHFPL5Q8TAF8 219 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 TMEM167AQ8TBQ9 72 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 MCRIP2Q9BUT9 160 aaKnown RBP7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 HINT2Q9BX68 163 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 FAM212BQ9NTI7 297 aaPredicted RBP7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 BET1LQ9NYM9 111 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 S4R3C0 116 aa7.53□□□□□ -1.2
RTFDC1-205ENST00000466260 NOTCH3Q9UM47 2321 aa7.52□□□□□ -1.2
RTFDC1-205ENST00000466260 TMEM238LA0A1B0GVL6 79 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 MARCH11A6NNE9 402 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 MPTX1A8MV57 137 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 H3BUA1 57 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 OVOL1O14753 267 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 RBFOX2O43251 390 aaKnown RBP eCLIP7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 RBMXL2O75526 392 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 DEDDO75618 318 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 SNAPINO95295 136 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 KRASP01116 189 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 F2RP25116 425 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 RPL12P30050 165 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 P2RY1P47900 373 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 PIGPP57054 158 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 OR2B8PP59922 312 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 KRTAP10-11P60412 298 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 SUPT4H1P63272 117 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 IL15RAQ13261 267 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 FHL3Q13643 280 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 KPRPQ5T749 579 aaPredicted RBP7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 C9orf66Q5T8R8 295 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 UBAC2Q8NBM4 344 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 CD300LFQ8TDQ1 290 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 DLX4Q92988 240 aaPredicted RBP7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 CXorf58Q96LI9 332 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 TMEM68Q96MH6 324 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 RSRP1Q9BUV0 290 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 GPR61Q9BZJ8 451 aa7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 STRAPQ9Y3F4 350 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-205ENST00000466260 TEX22C9J3V5 150 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 UPK2O00526 184 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 ST8SIA3O43173 380 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 SAP30O75446 220 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 SCAF4O95104 1147 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 LY86O95711 162 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 TRBV12-3P01733 135 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 IGHV3-23P01764 117 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 HSPB1P04792 205 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 IL6RP08887 468 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 SEC11BP0C7V7 166 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 AREGP15514 252 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 S100A10P60903 97 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 RHOGP84095 191 aa7.51□□□□□ -1.21
RTFDC1-205ENST00000466260 RUNX1Q01196 453 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms