RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 GEMIN2O14893 280 aaKnown RBP0.97□□□□□ -2.25
LRCH3-211ENST00000466054 HLA-DRB1P01911 266 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 TNNC2P02585 160 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 HIST1H1TP22492 207 aaPredicted RBP0.97□□□□□ -2.25
LRCH3-211ENST00000466054 SULT1A1P50225 295 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 SNRPD2P62316 118 aaKnown RBP0.97□□□□□ -2.25
LRCH3-211ENST00000466054 UBE2IP63279 158 aaKnown RBP0.97□□□□□ -2.25
LRCH3-211ENST00000466054 LPCAT3Q6P1A2 487 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 KLK6Q92876 244 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 NIPSNAP1Q9BPW8 284 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 MRPL57Q9BQC6 102 aaKnown RBP0.97□□□□□ -2.25
LRCH3-211ENST00000466054 FBXL12Q9NXK8 326 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 COL4A5P29400 1685 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 POLEQ07864 2286 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 MICAL3Q7RTP6 2002 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 GOLGA6L19H0YKK7 550 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 IFNA10P01566 189 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 COX6A1P12074 109 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 Q6ZQT0 140 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 TOMM6Q96B49 74 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 MIXL1Q9H2W2 232 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 CMTM6Q9NX76 183 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 RIC1Q4ADV7 1423 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 TECTAO75443 2155 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 NUP155O75694 1391 aa0.96□□□□□ -2.26
LRCH3-211ENST00000466054 SMIM23A6NLE4 172 aa0.95□□□□□ -2.26
LRCH3-211ENST00000466054 AHSA1O95433 338 aa0.95□□□□□ -2.26
LRCH3-211ENST00000466054 CTSDP07339 412 aaPredicted RBP0.95□□□□□ -2.26
LRCH3-211ENST00000466054 SPANXN5Q5MJ07 72 aa0.95□□□□□ -2.26
LRCH3-211ENST00000466054 C8orf74Q6P047 294 aa0.95□□□□□ -2.26
LRCH3-211ENST00000466054 MIR17HGQ75NE6 70 aa0.95□□□□□ -2.26
LRCH3-211ENST00000466054 PHF13Q86YI8 300 aaPredicted RBP0.95□□□□□ -2.26
LRCH3-211ENST00000466054 TERB2Q8NHR7 220 aa0.95□□□□□ -2.26
LRCH3-211ENST00000466054 GINS4Q9BRT9 223 aa0.95□□□□□ -2.26
LRCH3-211ENST00000466054 TP73-AS1Q9UF72 201 aa0.95□□□□□ -2.26
LRCH3-211ENST00000466054 RP1P56715 2156 aa0.95□□□□□ -2.26
LRCH3-211ENST00000466054 ROS1P08922 2347 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 CACNA1BQ00975 2339 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 EXPH5Q8NEV8 1989 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 A0A087WX48 190 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 TGIF2-C20orf24A0A0A6YYL0 155 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 DPRXA6NFQ7 191 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 IFNA16P05015 189 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 BRS3P32247 399 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 IMPG1Q17R60 797 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 ACOT6Q3I5F7 207 aaPredicted RBP0.94□□□□□ -2.26
LRCH3-211ENST00000466054 DPPA3Q6W0C5 159 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 FAM19A2Q8N3H0 131 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 H1FXQ92522 213 aaKnown RBP0.94□□□□□ -2.26
LRCH3-211ENST00000466054 SLC50A1Q9BRV3 221 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 C22orf24Q9Y442 160 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 TMEM56-RWDD3S4R434 201 aa0.94□□□□□ -2.26
LRCH3-211ENST00000466054 DOCK5Q9H7D0 1870 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 IGKV1D-42A0A075B6H8 117 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 TRAV9-1A0A075B6T8 112 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 FADS1O60427 444 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 TCL1BO95988 128 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 FKBP2P26885 142 aaKnown RBP0.93□□□□□ -2.26
LRCH3-211ENST00000466054 RPL5P46777 297 aaKnown RBP0.93□□□□□ -2.26
LRCH3-211ENST00000466054 PRB3Q04118 309 aaPredicted RBP0.93□□□□□ -2.26
LRCH3-211ENST00000466054 PTRHD1Q6GMV3 140 aaKnown RBP0.93□□□□□ -2.26
LRCH3-211ENST00000466054 BPIFA4PQ86YQ2 179 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 ANKRD29Q8N6D5 301 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 OTUD6BQ8N6M0 293 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 OR4E2Q8NGC2 313 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 DCUN1D1Q96GG9 259 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 ARL5BQ96KC2 179 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 PPP1R2P1Q96PQ5 205 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 TSPAN32Q96QS1 320 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 C20orf27Q9GZN8 174 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 C11orf68Q9H3H3 251 aaKnown RBP0.93□□□□□ -2.26
LRCH3-211ENST00000466054 SLC39A9Q9NUM3 307 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 VPS29Q9UBQ0 182 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 TNRC6BQ9UPQ9 1833 aaKnown RBP0.93□□□□□ -2.26
LRCH3-211ENST00000466054 MTUS2Q5JR59 1369 aa0.93□□□□□ -2.26
LRCH3-211ENST00000466054 WRNQ14191 1432 aaPredicted RBP eCLIP0.92□□□□□ -2.26
LRCH3-211ENST00000466054 LOC110117498A0A087WWA1 95 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 EXOC1LA0A1B0GW35 172 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 PQLC2LA1A4F0 135 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 FAAHO00519 579 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 SERPINA6P08185 405 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 CRYGAP11844 174 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 MIFP14174 115 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 SPI1P17947 270 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 KCNJ8Q15842 424 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 KHDC3LQ587J8 217 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 SPOPLQ6IQ16 392 aa0.92□□□□□ -2.26
LRCH3-211ENST00000466054 CLVS1Q8IUQ0 354 aaPredicted RBP0.92□□□□□ -2.26
LRCH3-211ENST00000466054 MRPL27Q9P0M9 148 aaKnown RBP0.92□□□□□ -2.26
LRCH3-211ENST00000466054 CHP2O43745 196 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 OR2T1O43869 369 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 OR1I1O60431 355 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 NIPSNAP2O75323 286 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 OR2B3O76000 313 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 ASAH2BP0C7U1 165 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 BAALC-AS2P0C853 105 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 PDE6HQ13956 83 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 RHEBQ15382 184 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 LINC00311Q8N616 119 aa0.91□□□□□ -2.26
LRCH3-211ENST00000466054 SIGLECL1Q8N7X8 197 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms