RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 SRPXP78539 464 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 SMCO1Q147U7 214 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 AARDQ4LEZ3 155 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 GGNBP1Q5YKI7 109 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 ACSM6Q6P461 480 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 IL34Q6ZMJ4 242 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 LYG2Q86SG7 212 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 LRTM2Q8N967 370 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 OR52E5Q8NH55 327 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 OR1S1Q8NH92 325 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 CXorf58Q96LI9 332 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 SEC22CQ9BRL7 303 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 RBKSQ9H477 322 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 THYN1Q9P016 225 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 TRBV7-1A0A0A6YYK4 115 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 FAM240BA0A1B0GVZ2 78 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 WI2-2373I1.2A0A1W2PRP0 233 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 F8W735 103 aaPredicted RBP8.9□□□□□ -0.98
CUX1-207ENST00000465461 I3L2K1 104 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 GGCTO75223 188 aaKnown RBP8.9□□□□□ -0.98
CUX1-207ENST00000465461 MT-CO2P00403 227 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 SNCAP37840 140 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 ASAH1Q13510 395 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 Q56UQ5 140 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 ZNF114Q8NC26 417 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 OR9G4Q8NGQ1 327 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 VN1R17PQ8TDU5 208 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 HEYLQ9NQ87 328 aaPredicted RBP8.9□□□□□ -0.98
CUX1-207ENST00000465461 NUDT15Q9NV35 164 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 C21orf62Q9NYP8 219 aa8.9□□□□□ -0.98
CUX1-207ENST00000465461 A0A1B0GU03 582 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 ZNF320A2RRD8 509 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 INS-IGF2F8WCM5 200 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 CYB5BO43169 146 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 WIPF1O43516 503 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 PITX3O75364 302 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 CSN3P07498 182 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 H2AFB2P0C5Z0 115 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 EGFEM1PQ0D2K5 195 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 PDLIM3Q53GG5 364 aaPredicted RBP8.89□□□□□ -0.99
CUX1-207ENST00000465461 MZT2BQ6NZ67 158 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 PLET1Q6UQ28 207 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 OR1L6Q8NGR2 347 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 COQ8AQ8NI60 647 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 TMEM170AQ8WVE7 144 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 OR4C12Q96R67 309 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 PRR25Q96S07 402 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 CHRDL1Q9BU40 450 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 MAGT1Q9H0U3 335 aa8.89□□□□□ -0.99
CUX1-207ENST00000465461 MRPL36Q9P0J6 103 aaKnown RBP8.89□□□□□ -0.99
CUX1-207ENST00000465461 IGHV3OR16-8A0A075B7F1 116 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 DUXBA0A1W2PPF3 345 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 TGOLN2O43493 480 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 IAPPP10997 89 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 TNFRSF9Q07011 255 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 TATDN3Q17R31 274 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 BSXQ3C1V8 233 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 UNQ9165/PRO28630Q6UXU0 137 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 ADAMTSL5Q6ZMM2 481 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 UXS1Q8NBZ7 420 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 CACNG8Q8WXS5 425 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 ELOVL1Q9BW60 279 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 GPR61Q9BZJ8 451 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 FNDC4Q9H6D8 234 aaPredicted RBP8.88□□□□□ -0.99
CUX1-207ENST00000465461 HSPB7Q9UBY9 170 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 TMED3Q9Y3Q3 217 aa8.88□□□□□ -0.99
CUX1-207ENST00000465461 NOTCH1P46531 2555 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 K7EIL1 84 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 CCSO14618 274 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 LY86O95711 162 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 SPNP16150 400 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 ADMP35318 185 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 OPRK1P41145 380 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 SUB1P53999 127 aaKnown RBP eCLIP8.87□□□□□ -0.99
CUX1-207ENST00000465461 TM4SF20Q53R12 229 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 FAM209BQ5JX69 171 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 PVRIGQ6DKI7 326 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 NRARPQ7Z6K4 114 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 GPHB5Q86YW7 130 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 SLC24A4Q8NFF2 622 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 ENKURQ8TC29 256 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 MRAPQ8TCY5 172 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 DTD1Q8TEA8 209 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 MITD1Q8WV92 249 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 ZNF414Q96IQ9 312 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 HIPK2Q9H2X6 1198 aa8.87□□□□□ -0.99
CUX1-207ENST00000465461 ZNF207O43670 478 aaKnown RBP8.86□□□□□ -0.99
CUX1-207ENST00000465461 IFNA10P01566 189 aa8.86□□□□□ -0.99
CUX1-207ENST00000465461 CTSGP08311 255 aa8.86□□□□□ -0.99
CUX1-207ENST00000465461 HTR2BP41595 481 aa8.86□□□□□ -0.99
CUX1-207ENST00000465461 MFAP4P55083 255 aa8.86□□□□□ -0.99
CUX1-207ENST00000465461 C2orf83Q53S99 150 aa8.86□□□□□ -0.99
CUX1-207ENST00000465461 ZNF431Q8TF32 576 aaPredicted RBP8.86□□□□□ -0.99
CUX1-207ENST00000465461 BSCL2Q96G97 398 aaPredicted RBP8.86□□□□□ -0.99
CUX1-207ENST00000465461 OR10C1Q96KK4 312 aa8.86□□□□□ -0.99
CUX1-207ENST00000465461 PEMTQ9UBM1 199 aa8.86□□□□□ -0.99
CUX1-207ENST00000465461 IZUMO1RA6ND01 250 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 C2orf70A6NJV1 201 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 LGALS9O00182 355 aa8.85□□□□□ -0.99
CUX1-207ENST00000465461 WRBO00258 174 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms