RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 C10orf99Q6UWK7 81 aa13.56□□□□□ -0.24
CPSF4-209ENST00000465132 GAR1Q9NY12 217 aaKnown RBP13.56□□□□□ -0.24
CPSF4-209ENST00000465132 KMT2CQ8NEZ4 4911 aaKnown RBP13.56□□□□□ -0.24
CPSF4-209ENST00000465132 L7N2F9 121 aa13.55□□□□□ -0.24
CPSF4-209ENST00000465132 SCGB2A1O75556 95 aa13.55□□□□□ -0.24
CPSF4-209ENST00000465132 RRAS2P62070 204 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-209ENST00000465132 RPL23AP62750 156 aaKnown RBP13.55□□□□□ -0.24
CPSF4-209ENST00000465132 VAMP2P63027 116 aa13.55□□□□□ -0.24
CPSF4-209ENST00000465132 ATP5G2Q06055 141 aa13.55□□□□□ -0.24
CPSF4-209ENST00000465132 EXOSC2Q13868 293 aaKnown RBP13.55□□□□□ -0.24
CPSF4-209ENST00000465132 KLK9Q2XQG4 91 aa13.55□□□□□ -0.24
CPSF4-209ENST00000465132 SLC24A4Q8NFF2 622 aa13.55□□□□□ -0.24
CPSF4-209ENST00000465132 KLK9Q9UKQ9 250 aa13.55□□□□□ -0.24
CPSF4-209ENST00000465132 TRBV9A0A0B4J1U6 114 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 A0A1B0GW64 132 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 RPS10-NUDT3A0A1W2PQS6 291 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 WI2-2373I1.2A0A1W2PRP0 233 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 MPTX1A8MV57 137 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 REG1AP05451 166 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 RHOGP84095 191 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 C2orf83Q53S99 150 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 SPINK9Q5DT21 86 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 DEFB121Q5J5C9 76 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 ETFRF1Q6IPR1 90 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 C11orf87Q6NUJ2 197 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 RNASEH2CQ8TDP1 164 aaKnown RBP13.54□□□□□ -0.24
CPSF4-209ENST00000465132 MS4A10Q96PG2 267 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 ATP6V0BQ99437 205 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 FBXL7Q9UJT9 491 aa13.54□□□□□ -0.24
CPSF4-209ENST00000465132 IGLV11-55A0A075B6I3 123 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 NUDT19A8MXV4 375 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 SOX15O60248 233 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 NXPH3O95157 252 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 NPY1RP25929 384 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 FGL1Q08830 312 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 EGFEM1PQ0D2K5 195 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 VN1R17PQ8TDU5 208 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 EEF1AKMT3Q96AZ1 226 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 SMIM8Q96KF7 97 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 P2RX4Q99571 388 aa13.53□□□□□ -0.24
CPSF4-209ENST00000465132 STRAPQ9Y3F4 350 aaKnown RBP13.53□□□□□ -0.24
CPSF4-209ENST00000465132 TRBV7-1A0A0A6YYK4 115 aa13.52□□□□□ -0.25
CPSF4-209ENST00000465132 SSSCA1O60232 199 aa13.52□□□□□ -0.25
CPSF4-209ENST00000465132 RPLP1P05386 114 aaKnown RBP13.52□□□□□ -0.25
CPSF4-209ENST00000465132 S100A10P60903 97 aa13.52□□□□□ -0.25
CPSF4-209ENST00000465132 BSXQ3C1V8 233 aa13.52□□□□□ -0.25
CPSF4-209ENST00000465132 LINC00482Q8N8I6 264 aa13.52□□□□□ -0.25
CPSF4-209ENST00000465132 ZNF491Q8N8L2 437 aa13.52□□□□□ -0.25
CPSF4-209ENST00000465132 MYOZ3Q8TDC0 251 aa13.52□□□□□ -0.25
CPSF4-209ENST00000465132 MAGT1Q9H0U3 335 aa13.52□□□□□ -0.25
CPSF4-209ENST00000465132 NBEAL2Q6ZNJ1 2754 aa13.52□□□□□ -0.25
CPSF4-209ENST00000465132 TSC22D2O75157 780 aa13.51□□□□□ -0.25
CPSF4-209ENST00000465132 OR2J3O76001 311 aa13.51□□□□□ -0.25
CPSF4-209ENST00000465132 MBPP02686 304 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-209ENST00000465132 IFNA4P05014 189 aa13.51□□□□□ -0.25
CPSF4-209ENST00000465132 OR8U8P0C7N1 319 aa13.51□□□□□ -0.25
CPSF4-209ENST00000465132 RNASE2P10153 161 aaKnown RBP13.51□□□□□ -0.25
CPSF4-209ENST00000465132 HOXD3P31249 432 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-209ENST00000465132 POLR2GP62487 172 aaKnown RBP eCLIP13.51□□□□□ -0.25
CPSF4-209ENST00000465132 C15orf32Q32M92 178 aa13.51□□□□□ -0.25
CPSF4-209ENST00000465132 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
CPSF4-209ENST00000465132 MISP3Q96FF7 219 aa13.51□□□□□ -0.25
CPSF4-209ENST00000465132 ZNF436Q9C0F3 470 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-209ENST00000465132 PSENENQ9NZ42 101 aa13.51□□□□□ -0.25
CPSF4-209ENST00000465132 LSM5Q9Y4Y9 91 aaKnown RBP13.51□□□□□ -0.25
CPSF4-209ENST00000465132 SIX6O95475 246 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 GIPP09681 153 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-209ENST00000465132 IAPPP10997 89 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 RAP2BP61225 183 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 RUNX1Q01196 453 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 ETV3LQ6ZN32 361 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 Q6ZNX1 250 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 FANCD2OSQ96PS1 177 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 TXN2Q99757 166 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 GPR61Q9BZJ8 451 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 KLK15Q9H2R5 256 aa13.5□□□□□ -0.25
CPSF4-209ENST00000465132 E5RGE8 158 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 K7EPK0 472 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 LGALS1P09382 135 aaKnown RBP13.49□□□□□ -0.25
CPSF4-209ENST00000465132 SLC25A4P12235 298 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 NPBWR1P48145 328 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 H2BFSP57053 126 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 IL15RAQ13261 267 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 FCN2Q15485 313 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 SPANXN5Q5MJ07 72 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 KLHL30-AS1Q8NEE0 82 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 THAP6Q8TBB0 222 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 DCUN1D4Q92564 292 aa13.49□□□□□ -0.25
CPSF4-209ENST00000465132 RANGRFQ9HD47 186 aaPredicted RBP13.49□□□□□ -0.25
CPSF4-209ENST00000465132 PAIP2BQ9ULR5 123 aaKnown RBP13.49□□□□□ -0.25
CPSF4-209ENST00000465132 PRH1P02810 166 aa13.48□□□□□ -0.25
CPSF4-209ENST00000465132 GPX4P36969 197 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-209ENST00000465132 OPRK1P41145 380 aa13.48□□□□□ -0.25
CPSF4-209ENST00000465132 BCAP31P51572 246 aa13.48□□□□□ -0.25
CPSF4-209ENST00000465132 MFAP4P55083 255 aa13.48□□□□□ -0.25
CPSF4-209ENST00000465132 RAB32Q13637 225 aa13.48□□□□□ -0.25
CPSF4-209ENST00000465132 PVRIGQ6DKI7 326 aa13.48□□□□□ -0.25
CPSF4-209ENST00000465132 PPP1R1CQ8WVI7 109 aa13.48□□□□□ -0.25
CPSF4-209ENST00000465132 CACNG8Q8WXS5 425 aa13.48□□□□□ -0.25
CPSF4-209ENST00000465132 DPF1Q92782 380 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms