RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 A0A0G2JRQ6 117 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 NXPH3O95157 252 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 MT-CO2P00403 227 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 CD7P09564 240 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 MFAP4P55083 255 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 RBPMS2Q6ZRY4 209 aaKnown RBP9.2□□□□□ -0.94
XRN1-204ENST00000465074 SELENOHQ8IZQ5 122 aaKnown RBP9.2□□□□□ -0.94
XRN1-204ENST00000465074 TMEM61Q8N0U2 210 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 DEFB125Q8N687 156 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 GLYATL2Q8WU03 294 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 GPR132Q9UNW8 380 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 KCNIP3Q9Y2W7 256 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 DNAH9Q9NYC9 4486 aa9.2□□□□□ -0.94
XRN1-204ENST00000465074 CRYM-AS1A6NIL9 109 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 A8MWP6 167 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 NUPL2O15504 423 aaKnown RBP9.19□□□□□ -0.94
XRN1-204ENST00000465074 GNG7O60262 68 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 B3GALNT1O75752 331 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 SUB1P53999 127 aaKnown RBP eCLIP9.19□□□□□ -0.94
XRN1-204ENST00000465074 DHODHQ02127 395 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 SURF2Q15527 256 aaPredicted RBP9.19□□□□□ -0.94
XRN1-204ENST00000465074 SPSB3Q6PJ21 355 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 Q6ZRM9 215 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 TOMM5Q8N4H5 51 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 OR52B4Q8NGK2 314 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 LHFPL5Q8TAF8 219 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 RBPMSQ93062 196 aaKnown RBP9.19□□□□□ -0.94
XRN1-204ENST00000465074 SCGB3A2Q96PL1 93 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 SOSTQ9BQB4 213 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 ZNF436Q9C0F3 470 aaPredicted RBP9.19□□□□□ -0.94
XRN1-204ENST00000465074 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
XRN1-204ENST00000465074 IGHV3-49A0A0A0MS15 119 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 OR11H12B2RN74 326 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 I3L2K1 104 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 CDS2O95674 445 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 CTSGP08311 255 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 P0C879 139 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 ADMP35318 185 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 FAUP35544 74 aaKnown RBP9.18□□□□□ -0.94
XRN1-204ENST00000465074 SLC16A13Q7RTY0 426 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 TMED4Q7Z7H5 227 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 TMEM190Q8WZ59 177 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 MARC2Q969Z3 335 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 GPR146Q96CH1 333 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 HEYLQ9NQ87 328 aaPredicted RBP9.18□□□□□ -0.94
XRN1-204ENST00000465074 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.18□□□□□ -0.94
XRN1-204ENST00000465074 GAR1Q9NY12 217 aaKnown RBP9.18□□□□□ -0.94
XRN1-204ENST00000465074 MRPL27Q9P0M9 148 aaKnown RBP9.18□□□□□ -0.94
XRN1-204ENST00000465074 CACNG5Q9UF02 275 aa9.18□□□□□ -0.94
XRN1-204ENST00000465074 CEBPZOSA8MTT3 80 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
XRN1-204ENST00000465074 NDUFA4O00483 81 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 INPP1P49441 399 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 ELLP55199 621 aaPredicted RBP9.17□□□□□ -0.94
XRN1-204ENST00000465074 AP3S2P59780 193 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 RELQ04864 619 aaPredicted RBP9.17□□□□□ -0.94
XRN1-204ENST00000465074 HAGHQ16775 308 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 SPANXN2Q5MJ10 180 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 ZNF114Q8NC26 417 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 RBM38Q9H0Z9 239 aaKnown RBP9.17□□□□□ -0.94
XRN1-204ENST00000465074 SRD5A3Q9H8P0 318 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 DAZ1Q9NQZ3 744 aaKnown RBP9.17□□□□□ -0.94
XRN1-204ENST00000465074 V9GYH0 126 aa9.17□□□□□ -0.94
XRN1-204ENST00000465074 IGKV3-7A0A075B6H7 116 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 IGHV3OR16-13A0A075B7E8 117 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 IGHV3-74A0A0B4J1X5 117 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 LINC00854A0A1B0GVQ3 168 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 RNASE2P10153 161 aaKnown RBP9.16□□□□□ -0.94
XRN1-204ENST00000465074 OPRK1P41145 380 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 SPCS3P61009 180 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 KLF9Q13886 244 aaPredicted RBP9.16□□□□□ -0.94
XRN1-204ENST00000465074 TMEM187Q14656 261 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 ZNF79Q15937 498 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 ANKRD55Q3KP44 614 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 LAMTOR1Q6IAA8 161 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 FAM219AQ8IW50 185 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 TMEM230Q96A57 120 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 TXN2Q99757 166 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 TENM3Q9P273 2699 aa9.16□□□□□ -0.94
XRN1-204ENST00000465074 A8MZ25 164 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 C8orf88P0DMB2 117 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 SULT1A3P0DMM9 295 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 SULT1A4P0DMN0 295 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 ANXA3P12429 323 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 VAMP1P23763 118 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 NPBWR1P48145 328 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 TFPI2P48307 235 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 MLANAQ16655 118 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 LYZL2Q7Z4W2 148 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 CCDC190Q86UF4 302 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 TRIM63Q969Q1 353 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 ATP6V0BQ99437 205 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 SPATA25Q9BR10 227 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 TM2D3Q9BRN9 247 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 RETNQ9HD89 108 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 UBQLN2Q9UHD9 624 aa9.15□□□□□ -0.94
XRN1-204ENST00000465074 NBEAL2Q6ZNJ1 2754 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 TRAV25A0A0B4J276 109 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms