RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 C7orf66A4D0T2 115 aa13.08□□□□□ -0.32
VPS52-215ENST00000464425 FAM90A26D6RGX4 464 aa13.08□□□□□ -0.32
VPS52-215ENST00000464425 IGHV3-23P01764 117 aa13.08□□□□□ -0.32
VPS52-215ENST00000464425 OR13C7P0DN81 318 aa13.08□□□□□ -0.32
VPS52-215ENST00000464425 ERHP84090 104 aaKnown RBP13.08□□□□□ -0.32
VPS52-215ENST00000464425 TNFRSF9Q07011 255 aa13.08□□□□□ -0.32
VPS52-215ENST00000464425 REC114Q7Z4M0 266 aa13.08□□□□□ -0.32
VPS52-215ENST00000464425 OR2C3Q8N628 320 aa13.08□□□□□ -0.32
VPS52-215ENST00000464425 UXS1Q8NBZ7 420 aa13.08□□□□□ -0.32
VPS52-215ENST00000464425 S4R3C0 116 aa13.08□□□□□ -0.32
VPS52-215ENST00000464425 MPTX1A8MV57 137 aa13.07□□□□□ -0.32
VPS52-215ENST00000464425 HIST1H1BP16401 226 aaKnown RBP13.07□□□□□ -0.32
VPS52-215ENST00000464425 ZP3P21754 424 aa13.07□□□□□ -0.32
VPS52-215ENST00000464425 ZNF114Q8NC26 417 aa13.07□□□□□ -0.32
VPS52-215ENST00000464425 OR1L6Q8NGR2 347 aa13.07□□□□□ -0.32
VPS52-215ENST00000464425 MRAPQ8TCY5 172 aa13.07□□□□□ -0.32
VPS52-215ENST00000464425 ENY2Q9NPA8 101 aa13.07□□□□□ -0.32
VPS52-215ENST00000464425 IGLV11-55A0A075B6I3 123 aa13.06□□□□□ -0.32
VPS52-215ENST00000464425 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.06□□□□□ -0.32
VPS52-215ENST00000464425 WI2-2373I1.2A0A1W2PRP0 233 aa13.06□□□□□ -0.32
VPS52-215ENST00000464425 CYB5BO43169 146 aa13.06□□□□□ -0.32
VPS52-215ENST00000464425 SAP30O75446 220 aa13.06□□□□□ -0.32
VPS52-215ENST00000464425 IAH1Q2TAA2 248 aaPredicted RBP13.06□□□□□ -0.32
VPS52-215ENST00000464425 OR4D5Q8NGN0 318 aa13.06□□□□□ -0.32
VPS52-215ENST00000464425 OR10C1Q96KK4 312 aa13.06□□□□□ -0.32
VPS52-215ENST00000464425 DMRT1Q9Y5R6 373 aa13.06□□□□□ -0.32
VPS52-215ENST00000464425 F11RQ9Y624 299 aaKnown RBP13.06□□□□□ -0.32
VPS52-215ENST00000464425 PPP5D1E7EU14 171 aa13.05□□□□□ -0.32
VPS52-215ENST00000464425 MED6O75586 246 aa13.05□□□□□ -0.32
VPS52-215ENST00000464425 HOXA1P49639 335 aaPredicted RBP13.05□□□□□ -0.32
VPS52-215ENST00000464425 SYNJ2BPP57105 145 aa13.05□□□□□ -0.32
VPS52-215ENST00000464425 ID3Q02535 119 aa13.05□□□□□ -0.32
VPS52-215ENST00000464425 KLF5Q13887 457 aaPredicted RBP13.05□□□□□ -0.32
VPS52-215ENST00000464425 RPEL1Q2QD12 228 aa13.05□□□□□ -0.32
VPS52-215ENST00000464425 SPINK9Q5DT21 86 aa13.05□□□□□ -0.32
VPS52-215ENST00000464425 ACSM6Q6P461 480 aa13.05□□□□□ -0.32
VPS52-215ENST00000464425 OR1P1Q8NH06 330 aa13.05□□□□□ -0.32
VPS52-215ENST00000464425 HIPK2Q9H2X6 1198 aa13.05□□□□□ -0.32
VPS52-215ENST00000464425 CEBPZOSA8MTT3 80 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 BMPR1BO00238 502 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 LY86O95711 162 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 SNCAP37840 140 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 SUB1P53999 127 aaKnown RBP eCLIP13.04□□□□□ -0.32
VPS52-215ENST00000464425 BSXQ3C1V8 233 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 SLC25A24Q6NUK1 477 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 CLEC19AQ6UXS0 136 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 GSG1LQ6UXU4 331 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 ZBTB8BQ8NAP8 495 aaPredicted RBP13.04□□□□□ -0.32
VPS52-215ENST00000464425 EEF1AKMT3Q96AZ1 226 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 C2orf50Q96LR7 162 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 OR4C12Q96R67 309 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 RBKSQ9H477 322 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 THYN1Q9P016 225 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 ALG5Q9Y673 324 aa13.04□□□□□ -0.32
VPS52-215ENST00000464425 C5orf51A6NDU8 294 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 MFSD2BA6NFX1 497 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 K7EIL1 84 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 CCSO14618 274 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 SSNA1O43805 119 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 HTR2BP41595 481 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 INSL3P51460 131 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 PVRIGQ6DKI7 326 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 DTD1Q8TEA8 209 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 ELOVL1Q9BW60 279 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 HEYLQ9NQ87 328 aaPredicted RBP13.03□□□□□ -0.32
VPS52-215ENST00000464425 ZMAT5Q9UDW3 170 aaKnown RBP13.03□□□□□ -0.32
VPS52-215ENST00000464425 U3KQ87 197 aa13.03□□□□□ -0.32
VPS52-215ENST00000464425 FAM25EA8MYX2 175 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 SYNGR2O43760 224 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 NXPH3O95157 252 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 NKX2-1P43699 371 aaPredicted RBP13.02□□□□□ -0.33
VPS52-215ENST00000464425 MFAP2P55001 183 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 ATP5IP56385 69 aaPredicted RBP13.02□□□□□ -0.33
VPS52-215ENST00000464425 DEFB121Q5J5C9 76 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 HAPLN4Q86UW8 402 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 OR9G4Q8NGQ1 327 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 CIB3Q96Q77 187 aaPredicted RBP13.02□□□□□ -0.33
VPS52-215ENST00000464425 PRR25Q96S07 402 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 ZC4H2Q9NQZ6 224 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 GSKIPQ9P0R6 139 aa13.02□□□□□ -0.33
VPS52-215ENST00000464425 IGHV3-21A0A0B4J1V1 117 aa13.01□□□□□ -0.33
VPS52-215ENST00000464425 OR2C1O95371 312 aa13.01□□□□□ -0.33
VPS52-215ENST00000464425 CLEC3BP05452 202 aa13.01□□□□□ -0.33
VPS52-215ENST00000464425 RNASE2P10153 161 aaKnown RBP13.01□□□□□ -0.33
VPS52-215ENST00000464425 IL15RAQ13261 267 aa13.01□□□□□ -0.33
VPS52-215ENST00000464425 C2orf83Q53S99 150 aa13.01□□□□□ -0.33
VPS52-215ENST00000464425 NOXA1Q86UR1 476 aa13.01□□□□□ -0.33
VPS52-215ENST00000464425 CXorf58Q96LI9 332 aa13.01□□□□□ -0.33
VPS52-215ENST00000464425 TRBV7-1A0A0A6YYK4 115 aa13□□□□□ -0.33
VPS52-215ENST00000464425 CORTO00230 105 aa13□□□□□ -0.33
VPS52-215ENST00000464425 GOSR2O14653 212 aa13□□□□□ -0.33
VPS52-215ENST00000464425 GGCTO75223 188 aaKnown RBP13□□□□□ -0.33
VPS52-215ENST00000464425 ARL3P36405 182 aa13□□□□□ -0.33
VPS52-215ENST00000464425 CYCSP99999 105 aaKnown RBP13□□□□□ -0.33
VPS52-215ENST00000464425 FAM209BQ5JX69 171 aa13□□□□□ -0.33
VPS52-215ENST00000464425 IL34Q6ZMJ4 242 aa13□□□□□ -0.33
VPS52-215ENST00000464425 SLC24A4Q8NFF2 622 aa13□□□□□ -0.33
VPS52-215ENST00000464425 ZNF502Q8TBZ5 544 aa13□□□□□ -0.33
VPS52-215ENST00000464425 NMES1Q9C002 83 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms