RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CXCL1P09341 107 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 IL3RAP26951 378 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 KLRD1Q13241 179 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 ZNF674Q2M3X9 581 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 TEPPQ6URK8 271 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 CYP2G1PQ6ZSU1 146 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 OR11H6Q8NGC7 330 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 RPUSD4Q96CM3 377 aaKnown RBP11.67□□□□□ -0.54
COL5A1-205ENST00000464187 MBD6Q96DN6 1003 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 PCGF1Q9BSM1 259 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 PARLQ9H300 379 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 KCNIP2Q9NS61 270 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 NAT8Q9UHE5 227 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 URGCP-MRPS24S4R325 110 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 A0A1W2PPV4 95 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 TOX4O94842 621 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 RPL35P42766 123 aaKnown RBP11.67□□□□□ -0.54
COL5A1-205ENST00000464187 BSXQ3C1V8 233 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 HCP5Q6MZN7 132 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 PDPNQ86YL7 162 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 C1QL4Q86Z23 238 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 TGIF2LXQ8IUE1 241 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 LINC00518Q8N0U6 118 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 OR5B3Q8NH48 314 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
COL5A1-205ENST00000464187 AKR1D1P51857 326 aa11.66□□□□□ -0.54
COL5A1-205ENST00000464187 B2MP61769 119 aa11.66□□□□□ -0.54
COL5A1-205ENST00000464187 SNRPEP62304 92 aaKnown RBP11.66□□□□□ -0.54
COL5A1-205ENST00000464187 Q5PR19 223 aa11.66□□□□□ -0.54
COL5A1-205ENST00000464187 STPG3Q8N7X2 389 aa11.66□□□□□ -0.54
COL5A1-205ENST00000464187 OR10W1Q8NGF6 305 aa11.66□□□□□ -0.54
COL5A1-205ENST00000464187 FLYWCH2Q96CP2 140 aaKnown RBP11.66□□□□□ -0.54
COL5A1-205ENST00000464187 AMMECR1Q9Y4X0 333 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-205ENST00000464187 INSIG2Q9Y5U4 225 aa11.66□□□□□ -0.54
COL5A1-205ENST00000464187 A0A096LNT2 108 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 C5orf52A6NGY3 159 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 C11orf94C9JXX5 98 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 STAG3L2P0CL84 134 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 STAG3L3P0CL85 134 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 ARL14EPLP0DKL9 152 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 RNASE2P10153 161 aaKnown RBP11.65□□□□□ -0.54
COL5A1-205ENST00000464187 HOXB4P17483 251 aaPredicted RBP11.65□□□□□ -0.54
COL5A1-205ENST00000464187 RND2P52198 227 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 ADIRFQ15847 76 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 TMEM241Q24JQ0 296 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 C2orf83Q53S99 150 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 OR4C13Q8NGP0 309 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 SSX3Q99909 188 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 NDUFA4L2Q9NRX3 87 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 TMEM242Q9NWH2 141 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 WNK2Q9Y3S1 2297 aa11.65□□□□□ -0.54
COL5A1-205ENST00000464187 ODF3BA8MYP8 253 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 IGLV2-23P01705 113 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 RPS10P46783 165 aaKnown RBP11.65□□□□□ -0.55
COL5A1-205ENST00000464187 RPL29P47914 159 aaKnown RBP11.65□□□□□ -0.55
COL5A1-205ENST00000464187 RPL23P62829 140 aaKnown RBP11.65□□□□□ -0.55
COL5A1-205ENST00000464187 RPL8P62917 257 aaKnown RBP11.65□□□□□ -0.55
COL5A1-205ENST00000464187 LDLRAD2Q5SZI1 272 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 SPNS3Q6ZMD2 512 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 MOB3BQ86TA1 216 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 OR1L8Q8NGR8 309 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 TMEM167AQ8TBQ9 72 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 ABHD5Q8WTS1 349 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 TBX15Q96SF7 602 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 WASHC3Q9Y3C0 194 aa11.65□□□□□ -0.55
COL5A1-205ENST00000464187 CLDN34H7C241 214 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 S100A6P06703 90 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 MSMBP08118 114 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 NPPCP23582 126 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 HTR1DP28221 377 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 ATP5G3P48201 142 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 ATP5IP56385 69 aaPredicted RBP11.64□□□□□ -0.55
COL5A1-205ENST00000464187 UBE2G2P60604 165 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 PRR20EP86478 221 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 PRR20CP86479 221 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 PRR20DP86480 221 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 PRR20BP86481 221 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 PRR20AP86496 221 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 PAX8Q06710 450 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 SPATA31B1PQ5VZV4 182 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 RPEQ96AT9 228 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 COMMD5Q9GZQ3 224 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 NAV3Q8IVL0 2385 aa11.64□□□□□ -0.55
COL5A1-205ENST00000464187 ABCA2Q9BZC7 2435 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 A0A1W2PRD5 423 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 A0A1W2PRF3 423 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 A0A1W2PRM7 423 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 B4DSR2 109 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 E7EUB6 86 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 LY6LH3BQJ8 138 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 UBE2CO00762 179 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 CXorf1O96002 111 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 LINC00869P0C866 280 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 RAB31Q13636 194 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 PRSS57Q6UWY2 283 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 OR4A5Q8NH83 315 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 CTDSP1Q9GZU7 261 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 DPM3Q9P2X0 92 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms