RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TPRA1Q86W33 373 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 TMEM17Q86X19 198 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 LILRB2Q8N423 598 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 PRNDQ9UKY0 176 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 CELA1Q9UNI1 258 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 MT-CO2P00403 227 aa10.42□□□□□ -0.74
SMC1A-204ENST00000463684 F2RP25116 425 aa10.42□□□□□ -0.74
SMC1A-204ENST00000463684 LPAR6P43657 344 aa10.42□□□□□ -0.74
SMC1A-204ENST00000463684 PRSS48Q7RTY5 328 aa10.42□□□□□ -0.74
SMC1A-204ENST00000463684 HOGA1Q86XE5 327 aa10.42□□□□□ -0.74
SMC1A-204ENST00000463684 CADM3Q8N126 398 aa10.42□□□□□ -0.74
SMC1A-204ENST00000463684 MOB3AQ96BX8 217 aa10.42□□□□□ -0.74
SMC1A-204ENST00000463684 TRDV1A0A1B0GX56 115 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 SMIM30A4D0T7 59 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 KNCNA6PVL3 124 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 NOTOA8MTQ0 251 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 IGHV3-48P01763 117 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 C4BPBP20851 252 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 G6PCP35575 357 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 HERV-K104P61576 105 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 STXBP6Q8NFX7 210 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 PINX1Q96BK5 328 aaKnown RBP10.41□□□□□ -0.74
SMC1A-204ENST00000463684 GRAMD2BQ96HH9 432 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 TSC22D3Q99576 134 aa10.41□□□□□ -0.74
SMC1A-204ENST00000463684 A0A1W2PS18 150 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 RLN1P04808 185 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 NPPCP23582 126 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 GNRHRP30968 328 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 NPBWR1P48145 328 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 ACTL10Q5JWF8 245 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 C1orf134Q5TEV5 83 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 C22orf42Q6IC83 251 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 ZNF600Q6ZNG1 722 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 Q6ZR54 194 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 MAPKAPK5-AS1Q8N8E1 139 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 CSNK1G2-AS1Q8NCQ2 148 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 FCAMRQ8WWV6 532 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 SCRT1Q9BWW7 348 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 DAPK2Q9UIK4 370 aa10.4□□□□□ -0.74
SMC1A-204ENST00000463684 PUS1Q9Y606 427 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMC1A-204ENST00000463684 TRAV18A0A075B6X5 111 aa10.39□□□□□ -0.75
SMC1A-204ENST00000463684 K7EQG2 157 aa10.39□□□□□ -0.75
SMC1A-204ENST00000463684 PGLYRP1O75594 196 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-204ENST00000463684 FCER2P06734 321 aa10.39□□□□□ -0.75
SMC1A-204ENST00000463684 ZNF688P0C7X2 276 aa10.39□□□□□ -0.75
SMC1A-204ENST00000463684 NUTF2P61970 127 aaKnown RBP10.39□□□□□ -0.75
SMC1A-204ENST00000463684 Q6ZRM9 215 aa10.39□□□□□ -0.75
SMC1A-204ENST00000463684 ZNF367Q7RTV3 350 aa10.39□□□□□ -0.75
SMC1A-204ENST00000463684 OR5AP2Q8NGF4 316 aa10.39□□□□□ -0.75
SMC1A-204ENST00000463684 NDUFB11Q9NX14 153 aa10.39□□□□□ -0.75
SMC1A-204ENST00000463684 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
SMC1A-204ENST00000463684 CDK2AP2O75956 126 aa10.38□□□□□ -0.75
SMC1A-204ENST00000463684 CD74P04233 296 aa10.38□□□□□ -0.75
SMC1A-204ENST00000463684 CMTM1Q8IZ96 169 aa10.38□□□□□ -0.75
SMC1A-204ENST00000463684 ZNF114Q8NC26 417 aa10.38□□□□□ -0.75
SMC1A-204ENST00000463684 NARS2Q96I59 477 aaKnown RBP10.38□□□□□ -0.75
SMC1A-204ENST00000463684 FAM210BQ96KR6 192 aa10.38□□□□□ -0.75
SMC1A-204ENST00000463684 C1QTNF4Q9BXJ3 329 aa10.38□□□□□ -0.75
SMC1A-204ENST00000463684 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
SMC1A-204ENST00000463684 RHBDL2Q9NX52 303 aa10.38□□□□□ -0.75
SMC1A-204ENST00000463684 DBX1A6NMT0 343 aa10.37□□□□□ -0.75
SMC1A-204ENST00000463684 SPART-AS1P0CW21 52 aa10.37□□□□□ -0.75
SMC1A-204ENST00000463684 ERHP84090 104 aaKnown RBP10.37□□□□□ -0.75
SMC1A-204ENST00000463684 TBCEQ15813 527 aaPredicted RBP10.37□□□□□ -0.75
SMC1A-204ENST00000463684 RNF212Q495C1 297 aa10.37□□□□□ -0.75
SMC1A-204ENST00000463684 OR4A16Q8NH70 328 aa10.37□□□□□ -0.75
SMC1A-204ENST00000463684 LGALS14Q8TCE9 139 aa10.37□□□□□ -0.75
SMC1A-204ENST00000463684 METTL26Q96S19 204 aa10.37□□□□□ -0.75
SMC1A-204ENST00000463684 RAB40CQ96S21 281 aa10.37□□□□□ -0.75
SMC1A-204ENST00000463684 HSPG2P98160 4391 aa10.37□□□□□ -0.75
SMC1A-204ENST00000463684 A0A1B0GU03 582 aa10.36□□□□□ -0.75
SMC1A-204ENST00000463684 EBAG9O00559 213 aa10.36□□□□□ -0.75
SMC1A-204ENST00000463684 TMEM50AO95807 157 aa10.36□□□□□ -0.75
SMC1A-204ENST00000463684 CBX5P45973 191 aa10.36□□□□□ -0.75
SMC1A-204ENST00000463684 P2RY1P47900 373 aa10.36□□□□□ -0.75
SMC1A-204ENST00000463684 EIF2B2P49770 351 aaKnown RBP10.36□□□□□ -0.75
SMC1A-204ENST00000463684 DHRS11Q6UWP2 260 aa10.36□□□□□ -0.75
SMC1A-204ENST00000463684 EHFQ9NZC4 300 aa10.36□□□□□ -0.75
SMC1A-204ENST00000463684 RRP15Q9Y3B9 282 aaKnown RBP10.36□□□□□ -0.75
SMC1A-204ENST00000463684 TMEM189A5PLL7 270 aa10.35□□□□□ -0.75
SMC1A-204ENST00000463684 PRCDQ00LT1 54 aa10.35□□□□□ -0.75
SMC1A-204ENST00000463684 DHRS2Q13268 280 aa10.35□□□□□ -0.75
SMC1A-204ENST00000463684 KCTD21Q4G0X4 260 aa10.35□□□□□ -0.75
SMC1A-204ENST00000463684 H2BFWTQ7Z2G1 175 aa10.35□□□□□ -0.75
SMC1A-204ENST00000463684 DCANP1Q8TF63 244 aa10.35□□□□□ -0.75
SMC1A-204ENST00000463684 ZNF2Q9BSG1 426 aaPredicted RBP10.35□□□□□ -0.75
SMC1A-204ENST00000463684 DIABLOQ9NR28 239 aa10.35□□□□□ -0.75
SMC1A-204ENST00000463684 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
SMC1A-204ENST00000463684 A0A0A6YYH2 397 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 A6NJ64 397 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 SCGB2A1O75556 95 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 CRYBB3P26998 211 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 FGF9P31371 208 aaPredicted RBP10.34□□□□□ -0.75
SMC1A-204ENST00000463684 SNCAP37840 140 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 EMP1P54849 157 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 HSPE1P61604 102 aaKnown RBP10.34□□□□□ -0.75
SMC1A-204ENST00000463684 PSMG4Q5JS54 123 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 SFXN4Q6P4A7 337 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 TMEM230Q96A57 120 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms