RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CRIP2P52943 208 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-204ENST00000463622 PRRX1P54821 245 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 H2BFSP57053 126 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 OR2B8PP59922 312 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 AANATQ16613 207 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 NSUN5P1Q3KNT7 163 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM95Q3KNT9 176 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 ABCA11PQ4W5N1 156 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM128Q5BJH2 165 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 SPINK9Q5DT21 86 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 NMSQ5H8A3 153 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 MINOS1Q5TGZ0 78 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 GGNBP1Q5YKI7 109 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 PLET1Q6UQ28 207 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 Q8N9W7 124 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-204ENST00000463622 MUC7Q8TAX7 377 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF431Q8TF32 576 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-204ENST00000463622 DEDD2Q8WXF8 326 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 GPR146Q96CH1 333 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 MALSU1Q96EH3 234 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 GALNT14Q96FL9 552 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 SEC22AQ96IW7 307 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 AKR1E2Q96JD6 320 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 CITED2Q99967 270 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-204ENST00000463622 HSPB9Q9BQS6 159 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM222Q9H0R3 208 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 FBXL15Q9H469 300 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 ZFP57Q9NU63 452 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 COPZ2Q9P299 210 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 PEMTQ9UBM1 199 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 C14orf166Q9Y224 244 aaKnown RBP2.79□□□□□ -1.96
SCFD1-204ENST00000463622 TBL2Q9Y4P3 447 aaKnown RBP2.79□□□□□ -1.96
SCFD1-204ENST00000463622 MINOS1-NBL1R4GNA1 71 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 hCG_1809904A0A1W2PP81 198 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 A0A1W2PPE2 198 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 A0A1W2PR64 198 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 A0A1W2PRV1 198 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 GOSR2O14653 212 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 GAGE7O76087 117 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 CDS2O95674 445 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 KRASP01116 189 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 GAPDHP04406 335 aaKnown RBP2.78□□□□□ -1.96
SCFD1-204ENST00000463622 GAGE12FP0CL80 117 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 GAGE12GP0CL81 117 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 GAGE12IP0CL82 117 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 APELAP0DMC3 54 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 BLCAPP62952 87 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 DEFA5Q01523 94 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 GAGE1Q13065 139 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 GAGE4Q13068 117 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 IL15RAQ13261 267 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 EBI3Q14213 229 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 PSG5Q15238 335 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 MSMO1Q15800 293 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 OR4A47Q6IF82 309 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 FAM71F2Q6NXP2 309 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 C10orf99Q6UWK7 81 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 PUSL1Q8N0Z8 303 aaKnown RBP2.78□□□□□ -1.96
SCFD1-204ENST00000463622 C12orf45Q8N5I9 185 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-204ENST00000463622 UXS1Q8NBZ7 420 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 OR4C13Q8NGP0 309 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 OR2T6Q8NHC8 308 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 ZFAND1Q8TCF1 268 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 MITD1Q8WV92 249 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM56Q96MV1 263 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 CLCC1Q96S66 551 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 S1PR3Q99500 378 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 HSD17B10Q99714 261 aaKnown RBP2.78□□□□□ -1.96
SCFD1-204ENST00000463622 SSX3Q99909 188 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 FAM103A1Q9BTL3 118 aaKnown RBP2.78□□□□□ -1.96
SCFD1-204ENST00000463622 ALX4Q9H161 411 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-204ENST00000463622 OR51J1Q9H342 316 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 TCF19Q9Y242 345 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 WASHC3Q9Y3C0 194 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 AMMECR1Q9Y4X0 333 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-204ENST00000463622 LSM4Q9Y4Z0 139 aaKnown RBP2.78□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM56-RWDD3S4R434 201 aa2.78□□□□□ -1.96
SCFD1-204ENST00000463622 TRAV14DV4A0A0A6YYC5 116 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 H7C2Y5 167 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 PITX3O75364 302 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 CCNKO75909 580 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 OR2F2O95006 317 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 NDUFA3O95167 84 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 TMEM50AO95807 157 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 SULT1A3P0DMM9 295 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 SULT1A4P0DMN0 295 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 CD1BP29016 333 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 LINC01547P58512 204 aaPredicted RBP2.78□□□□□ -1.97
SCFD1-204ENST00000463622 RELQ04864 619 aaPredicted RBP2.78□□□□□ -1.97
SCFD1-204ENST00000463622 HES1Q14469 280 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 MMDQ15546 238 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 LRRC75BQ2VPJ9 315 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 CXorf66Q5JRM2 361 aaPredicted RBP2.78□□□□□ -1.97
SCFD1-204ENST00000463622 PDPNQ86YL7 162 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 SGPP2Q8IWX5 399 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 CMTM1Q8IZ96 169 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 OR8H3Q8N146 312 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 FAM71E2Q8N5Q1 922 aa2.78□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms