RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GABARAPH6UMI1 98 aa15.26■□□□□ 0.03
PDLIM4-205ENST00000463615 PI3P19957 117 aa15.26■□□□□ 0.03
PDLIM4-205ENST00000463615 UCP1P25874 307 aa15.26■□□□□ 0.03
PDLIM4-205ENST00000463615 RNASE12Q5GAN4 147 aaKnown RBP15.26■□□□□ 0.03
PDLIM4-205ENST00000463615 Q6ZWC4 215 aa15.26■□□□□ 0.03
PDLIM4-205ENST00000463615 OR4D10Q8NGI6 311 aa15.26■□□□□ 0.03
PDLIM4-205ENST00000463615 MISP3Q96FF7 219 aa15.26■□□□□ 0.03
PDLIM4-205ENST00000463615 KIR2DL5BA0A0G2JN68 375 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 KIR2DL5BA0A0G2JPC4 375 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 IGHV7-4-1A0A0J9YVY3 117 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 UBE2CO00762 179 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 CHEK1O14757 476 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 CTSDP07339 412 aaPredicted RBP15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 APOC4P55056 127 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 AARDQ4LEZ3 155 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 KIR2DL5AQ8N109 375 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 CCDC71LQ8N9Z2 235 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 KIR2DL5BQ8NHK3 375 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 COPZ2Q9P299 210 aa15.25■□□□□ 0.03
PDLIM4-205ENST00000463615 RAB3DO95716 219 aa15.24■□□□□ 0.03
PDLIM4-205ENST00000463615 IZUMO4Q1ZYL8 232 aa15.24■□□□□ 0.03
PDLIM4-205ENST00000463615 STEAP1BQ6NZ63 245 aa15.24■□□□□ 0.03
PDLIM4-205ENST00000463615 GPR141Q7Z602 305 aa15.24■□□□□ 0.03
PDLIM4-205ENST00000463615 TMEM116Q8NCL8 245 aa15.24■□□□□ 0.03
PDLIM4-205ENST00000463615 OR13C8Q8NGS7 320 aa15.24■□□□□ 0.03
PDLIM4-205ENST00000463615 RHPN1-AS1Q9BWJ2 59 aa15.24■□□□□ 0.03
PDLIM4-205ENST00000463615 RABL2AQ9UBK7 228 aaPredicted RBP15.24■□□□□ 0.03
PDLIM4-205ENST00000463615 RABL2BQ9UNT1 228 aa15.24■□□□□ 0.03
PDLIM4-205ENST00000463615 IGHV3OR16-8A0A075B7F1 116 aa15.23■□□□□ 0.03
PDLIM4-205ENST00000463615 ST8SIA3O43173 380 aa15.23■□□□□ 0.03
PDLIM4-205ENST00000463615 ZNF207O43670 478 aaKnown RBP15.23■□□□□ 0.03
PDLIM4-205ENST00000463615 AKR1C2P52895 323 aa15.23■□□□□ 0.03
PDLIM4-205ENST00000463615 MEF2DQ14814 521 aa15.23■□□□□ 0.03
PDLIM4-205ENST00000463615 SURF2Q15527 256 aaPredicted RBP15.23■□□□□ 0.03
PDLIM4-205ENST00000463615 FAM90A2PQ658T7 463 aa15.23■□□□□ 0.03
PDLIM4-205ENST00000463615 RNF2Q99496 336 aa15.23■□□□□ 0.03
PDLIM4-205ENST00000463615 PLECQ15149 4684 aaKnown RBP15.23■□□□□ 0.03
PDLIM4-205ENST00000463615 TRAV14DV4A0A0A6YYC5 116 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 CORTO00230 105 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 CTDSP2O14595 271 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 CTDSPLO15194 276 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 GNG7O60262 68 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 CD5P06127 495 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 SNCAP37840 140 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 NPBWR1P48145 328 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 PPP5CP53041 499 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 CMC4P56277 68 aaPredicted RBP15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 SPCS2Q15005 226 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 BSXQ3C1V8 233 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 FAM219AQ8IW50 185 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 SLC35G3Q8N808 338 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 DUSP18Q8NEJ0 188 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 SMIM4Q8WVI0 70 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 BCL7BQ9BQE9 202 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 UBQLN2Q9UHD9 624 aa15.22■□□□□ 0.03
PDLIM4-205ENST00000463615 CDS2O95674 445 aa15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 RNASE2P10153 161 aaKnown RBP15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 ATF4P18848 351 aaPredicted RBP15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 BMI1P35226 326 aa15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 SUB1P53999 127 aaKnown RBP eCLIP15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 MARCH1Q8TCQ1 289 aa15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 PINX1Q96BK5 328 aaKnown RBP15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 GALNT14Q96FL9 552 aa15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 GINS3Q9BRX5 216 aa15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 TMEM222Q9H0R3 208 aa15.21■□□□□ 0.03
PDLIM4-205ENST00000463615 A0A0G2JRQ6 117 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 RGS5O15539 181 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 JTBO76095 146 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 YIF1AO95070 293 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 IFNA17P01571 189 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 IGHV3-48P01763 117 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 RPL5P46777 297 aaKnown RBP15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 TNFRSF9Q07011 255 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 TRIM16LQ309B1 348 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 SP6Q3SY56 376 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 SCGB2B2Q4G0G5 96 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 SPINK9Q5DT21 86 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 TOMM20LQ6UXN7 152 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 OR52E5Q8NH55 327 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 GLYATL2Q8WU03 294 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 RAB2BQ8WUD1 216 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 RRNAD1Q96FB5 475 aaKnown RBP15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 RTBDNQ9BSG5 229 aaPredicted RBP15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 PDCD10Q9BUL8 212 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 VSIRQ9H7M9 311 aa15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 CCDC59Q9P031 241 aaKnown RBP15.2■□□□□ 0.02
PDLIM4-205ENST00000463615 SPRY2O43597 315 aa15.19■□□□□ 0.02
PDLIM4-205ENST00000463615 TMEM50AO95807 157 aa15.19■□□□□ 0.02
PDLIM4-205ENST00000463615 ZNF600Q6ZNG1 722 aa15.19■□□□□ 0.02
PDLIM4-205ENST00000463615 DYNC2LI1Q8TCX1 351 aa15.19■□□□□ 0.02
PDLIM4-205ENST00000463615 RNF183Q96D59 192 aa15.19■□□□□ 0.02
PDLIM4-205ENST00000463615 ZFAND3Q9H8U3 227 aa15.19■□□□□ 0.02
PDLIM4-205ENST00000463615 MAP6D1Q9H9H5 199 aa15.19■□□□□ 0.02
PDLIM4-205ENST00000463615 DISC1C4P0D8 188 aa15.18■□□□□ 0.02
PDLIM4-205ENST00000463615 ETV6P41212 452 aa15.18■□□□□ 0.02
PDLIM4-205ENST00000463615 TMBIM6P55061 237 aa15.18■□□□□ 0.02
PDLIM4-205ENST00000463615 SPCS3P61009 180 aa15.18■□□□□ 0.02
PDLIM4-205ENST00000463615 Q6ZRM9 215 aa15.18■□□□□ 0.02
PDLIM4-205ENST00000463615 STPG3Q8N7X2 389 aa15.18■□□□□ 0.02
PDLIM4-205ENST00000463615 NAA60Q9H7X0 242 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms