RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 TMED4Q7Z7H5 227 aa9.21□□□□□ -0.94
HPS1-206ENST00000462743 GAR1Q9NY12 217 aaKnown RBP9.21□□□□□ -0.94
HPS1-206ENST00000462743 C21orf62Q9NYP8 219 aa9.21□□□□□ -0.94
HPS1-206ENST00000462743 CACNG5Q9UF02 275 aa9.21□□□□□ -0.94
HPS1-206ENST00000462743 PPP5D1E7EU14 171 aa9.2□□□□□ -0.94
HPS1-206ENST00000462743 F8W735 103 aaPredicted RBP9.2□□□□□ -0.94
HPS1-206ENST00000462743 PITX3O75364 302 aa9.2□□□□□ -0.94
HPS1-206ENST00000462743 RNASE2P10153 161 aaKnown RBP9.2□□□□□ -0.94
HPS1-206ENST00000462743 SNCAP37840 140 aa9.2□□□□□ -0.94
HPS1-206ENST00000462743 PPP1R1AQ13522 171 aa9.2□□□□□ -0.94
HPS1-206ENST00000462743 ANKRD55Q3KP44 614 aa9.2□□□□□ -0.94
HPS1-206ENST00000462743 BSCL2Q96G97 398 aaPredicted RBP9.2□□□□□ -0.94
HPS1-206ENST00000462743 ZNF256Q9Y2P7 627 aaPredicted RBP9.2□□□□□ -0.94
HPS1-206ENST00000462743 PRKDCP78527 4128 aaKnown RBP9.2□□□□□ -0.94
HPS1-206ENST00000462743 C9orf170A2RU37 121 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 A8MWP6 167 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 CORTO00230 105 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 LYRM1O43325 122 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 TGOLN2O43493 480 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 IGHV3-23P01764 117 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 CTSGP08311 255 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 MFAP4P55083 255 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 ELLP55199 621 aaPredicted RBP9.19□□□□□ -0.94
HPS1-206ENST00000462743 ATP5IP56385 69 aaPredicted RBP9.19□□□□□ -0.94
HPS1-206ENST00000462743 DCTN2Q13561 401 aaKnown RBP9.19□□□□□ -0.94
HPS1-206ENST00000462743 SMCO1Q147U7 214 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 PLET1Q6UQ28 207 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 ADAMTSL5Q6ZMM2 481 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 OR2K2Q8NGT1 345 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 MRAPQ8TCY5 172 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 ZNF436Q9C0F3 470 aaPredicted RBP9.19□□□□□ -0.94
HPS1-206ENST00000462743 ENY2Q9NPA8 101 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 PRR13Q9NZ81 148 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 HSPB7Q9UBY9 170 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 TMED3Q9Y3Q3 217 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 LSM4Q9Y4Z0 139 aaKnown RBP9.19□□□□□ -0.94
HPS1-206ENST00000462743 S4R3C0 116 aa9.19□□□□□ -0.94
HPS1-206ENST00000462743 LINC00854A0A1B0GVQ3 168 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 MT-CO2P00403 227 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 OR4E1P0C645 316 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 C8orf88P0DMB2 117 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 VAMP1P23763 118 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 GPR183P32249 361 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 ADMP35318 185 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 HTR2BP41595 481 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 ZNF846Q147U1 533 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 C2orf83Q53S99 150 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 SPINK9Q5DT21 86 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 WDR12Q9GZL7 423 aaKnown RBP9.18□□□□□ -0.94
HPS1-206ENST00000462743 FLVCR2Q9UPI3 526 aa9.18□□□□□ -0.94
HPS1-206ENST00000462743 TGP01266 2768 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 C2orf70A6NJV1 201 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 FAM90A26D6RGX4 464 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 TCRBP04435 133 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 SPNP16150 400 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 HOXA1P49639 335 aaPredicted RBP9.17□□□□□ -0.94
HPS1-206ENST00000462743 TNFRSF9Q07011 255 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 DHRS2Q13268 280 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 LYG2Q86SG7 212 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 NOXA1Q86UR1 476 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 MARC2Q969Z3 335 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 MISP3Q96FF7 219 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 CHRDL1Q9BU40 450 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 PALMDQ9NP74 551 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 HEYLQ9NQ87 328 aaPredicted RBP9.17□□□□□ -0.94
HPS1-206ENST00000462743 TECRQ9NZ01 308 aaKnown RBP9.17□□□□□ -0.94
HPS1-206ENST00000462743 U3KQ87 197 aa9.17□□□□□ -0.94
HPS1-206ENST00000462743 IGHV3-21A0A0B4J1V1 117 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 K7EMT4 169 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 NDUFA4O00483 81 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 FOLR2P14207 255 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 GP9P14770 177 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 CBLN1P23435 193 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 NPBWR1P48145 328 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 ASAH1Q13510 395 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 DEFB114Q30KQ6 69 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 DUSP18Q8NEJ0 188 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 RNASEH2CQ8TDP1 164 aaKnown RBP9.16□□□□□ -0.94
HPS1-206ENST00000462743 TMEM190Q8WZ59 177 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 ZNF414Q96IQ9 312 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 PRR25Q96S07 402 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 HIPK2Q9H2X6 1198 aa9.16□□□□□ -0.94
HPS1-206ENST00000462743 MRPL27Q9P0M9 148 aaKnown RBP9.16□□□□□ -0.94
HPS1-206ENST00000462743 OR2T8A6NH00 312 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 CEBPZOSA8MTT3 80 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 NUPL2O15504 423 aaKnown RBP9.15□□□□□ -0.94
HPS1-206ENST00000462743 UPK1BO75841 260 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 LY86O95711 162 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 TMEM50AO95807 157 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 ID3Q02535 119 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 Q56UQ5 140 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 DEFB121Q5J5C9 76 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 GGNBP1Q5YKI7 109 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 UNQ9165/PRO28630Q6UXU0 137 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 OR4X1Q8NH49 305 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 OR1S1Q8NH92 325 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 COQ8AQ8NI60 647 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 MITD1Q8WV92 249 aa9.15□□□□□ -0.94
HPS1-206ENST00000462743 TMEM170AQ8WVE7 144 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms