RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ADAP1O75689 374 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 SCAF4O95104 1147 aaKnown RBP4.95□□□□□ -1.62
SF3B1-206ENST00000462613 SCGB1D2O95969 90 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 IFNA4P05014 189 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 NPY1RP25929 384 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 OPRK1P41145 380 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 NPBWR1P48145 328 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 MFAP4P55083 255 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 VAMP2P63027 116 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 CYCSP99999 105 aaKnown RBP4.95□□□□□ -1.62
SF3B1-206ENST00000462613 DEFB136Q30KP8 78 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 Q56UQ5 140 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 SPINK9Q5DT21 86 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 ZNF343Q6P1L6 599 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 SPSB3Q6PJ21 355 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 Q6ZRM9 215 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 RNASEH2CQ8TDP1 164 aaKnown RBP4.95□□□□□ -1.62
SF3B1-206ENST00000462613 DCUN1D4Q92564 292 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 RCC1LQ96I51 464 aaKnown RBP4.95□□□□□ -1.62
SF3B1-206ENST00000462613 RAB40CQ96S21 281 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 ATP6V0BQ99437 205 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 P2RX4Q99571 388 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 ELOVL1Q9BW60 279 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 RBKSQ9H477 322 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 C21orf62Q9NYP8 219 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 PEMTQ9UBM1 199 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 PAIP2BQ9ULR5 123 aaKnown RBP4.95□□□□□ -1.62
SF3B1-206ENST00000462613 IGHV4OR15-8A0A075B7B6 117 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 TRAV30A0A087WSZ9 112 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 A0A087WW49 117 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.94□□□□□ -1.62
SF3B1-206ENST00000462613 OVOL1O14753 267 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 NUPL2O15504 423 aaKnown RBP4.94□□□□□ -1.62
SF3B1-206ENST00000462613 GNG7O60262 68 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 GGCTO75223 188 aaKnown RBP4.94□□□□□ -1.62
SF3B1-206ENST00000462613 NDUFB8O95169 186 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 RLN2P04090 185 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 PET100P0DJ07 73 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 SLC25A4P12235 298 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 ARL3P36405 182 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 RELQ04864 619 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-206ENST00000462613 KIAA0141Q14154 515 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-206ENST00000462613 KLK9Q2XQG4 91 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 FAM106AQ4KMX7 169 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 C2orf83Q53S99 150 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 ACSM6Q6P461 480 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 CLEC19AQ6UXS0 136 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 ETV3LQ6ZN32 361 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 ZBTB8BQ8NAP8 495 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-206ENST00000462613 UBAC2Q8NBM4 344 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 BSCL2Q96G97 398 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-206ENST00000462613 RAX2Q96IS3 184 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 C2orf50Q96LR7 162 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 FANCD2OSQ96PS1 177 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 OR4C12Q96R67 309 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 TXN2Q99757 166 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 KLK9Q9UKQ9 250 aa4.94□□□□□ -1.62
SF3B1-206ENST00000462613 STRAPQ9Y3F4 350 aaKnown RBP4.94□□□□□ -1.62
SF3B1-206ENST00000462613 MFSD2BA6NFX1 497 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 CCSO14618 274 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 GOSR2O14653 212 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 TGOLN2O43493 480 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 SSSCA1O60232 199 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 PITX3O75364 302 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 MT-CO2P00403 227 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 CLEC3BP05452 202 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 FABP1P07148 127 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 RNASE2P10153 161 aaKnown RBP4.93□□□□□ -1.62
SF3B1-206ENST00000462613 IAPPP10997 89 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 HOXD3P31249 432 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-206ENST00000462613 GPR183P32249 361 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 INSL3P51460 131 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 S100A10P60903 97 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 DEFA5Q01523 94 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 ID3Q02535 119 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 FHL3Q13643 280 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 SPANXN5Q5MJ07 72 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 C9orf66Q5T8R8 295 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 HIST2H2BDQ6DRA6 164 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 C18orf65Q6ZTR6 163 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 C1QL4Q86Z23 238 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 LINC00482Q8N8I6 264 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 ZNF502Q8TBZ5 544 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 SCARB1Q8WTV0 552 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 SLC35E1Q96K37 410 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 DUX3Q96PT4 197 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 MAGT1Q9H0U3 335 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 MED28Q9H204 178 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 PSENENQ9NZ42 101 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 LSM5Q9Y4Y9 91 aaKnown RBP4.93□□□□□ -1.62
SF3B1-206ENST00000462613 S4R3C0 116 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 SORL1Q92673 2214 aa4.93□□□□□ -1.62
SF3B1-206ENST00000462613 ZNF320A2RRD8 509 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 C7orf66A4D0T2 115 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 OR2T8A6NH00 312 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 MPTX1A8MV57 137 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 SEC14L6B5MCN3 397 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 K7EIM0 57 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 TSC22D2O75157 780 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 IGHV3-23P01764 117 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms