RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 TRAV5A0A0B4J249 113 aa15.05■□□□□ -0
HPS3-204ENST00000462030 TRAV34A0A0B4J273 112 aa15.05■□□□□ -0
HPS3-204ENST00000462030 NDUFB8O95169 186 aa15.05■□□□□ -0
HPS3-204ENST00000462030 IGKV1-16P04430 117 aa15.05■□□□□ -0
HPS3-204ENST00000462030 USF1P22415 310 aaPredicted RBP15.05■□□□□ -0
HPS3-204ENST00000462030 DNAJC4Q9NNZ3 241 aa15.05■□□□□ -0
HPS3-204ENST00000462030 TUBG2Q9NRH3 451 aa15.05■□□□□ -0
HPS3-204ENST00000462030 SLC35D1Q9NTN3 355 aa15.05■□□□□ -0
HPS3-204ENST00000462030 IZUMO1RA6ND01 250 aa15.04■□□□□ -0
HPS3-204ENST00000462030 SRRM4A7MD48 611 aaKnown RBP15.04■□□□□ -0
HPS3-204ENST00000462030 MZT1Q08AG7 82 aa15.04■□□□□ -0
HPS3-204ENST00000462030 ZNF439Q8NDP4 499 aa15.04■□□□□ -0
HPS3-204ENST00000462030 C18orf32Q8TCD1 76 aa15.04■□□□□ -0
HPS3-204ENST00000462030 ZNRD1Q9P1U0 126 aa15.04■□□□□ -0
HPS3-204ENST00000462030 PRNDQ9UKY0 176 aa15.04■□□□□ -0
HPS3-204ENST00000462030 A0A1W2PRE2 83 aa15.04■□□□□ -0
HPS3-204ENST00000462030 LNP1A1A4G5 178 aa15.04■□□□□ -0
HPS3-204ENST00000462030 ITGB1BP1O14713 200 aa15.04■□□□□ -0
HPS3-204ENST00000462030 HNRNPA3P51991 378 aaKnown RBP15.04■□□□□ -0
HPS3-204ENST00000462030 TAS2R45P59539 299 aa15.04■□□□□ -0
HPS3-204ENST00000462030 POU2AF1Q16633 256 aa15.04■□□□□ -0
HPS3-204ENST00000462030 LCN12Q6JVE5 192 aa15.04■□□□□ -0
HPS3-204ENST00000462030 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.04■□□□□ -0
HPS3-204ENST00000462030 SLC25A33Q9BSK2 321 aa15.04■□□□□ -0
HPS3-204ENST00000462030 ZFHX4Q86UP3 3567 aa15.04■□□□□ -0
HPS3-204ENST00000462030 CACNA1GO43497 2377 aa15.03■□□□□ -0
HPS3-204ENST00000462030 KBTBD11-OT1A0A1B0GTJ5 212 aa15.03■□□□□ -0
HPS3-204ENST00000462030 UPK2O00526 184 aa15.03■□□□□ -0
HPS3-204ENST00000462030 TCF21O43680 179 aa15.03■□□□□ -0
HPS3-204ENST00000462030 MMP23AO75900 390 aa15.03■□□□□ -0
HPS3-204ENST00000462030 C8orf88P0DMB2 117 aa15.03■□□□□ -0
HPS3-204ENST00000462030 LAMTOR2Q9Y2Q5 125 aa15.03■□□□□ -0
HPS3-204ENST00000462030 ZNF883P0CG24 379 aa15.03■□□□□ -0
HPS3-204ENST00000462030 OR10W1Q8NGF6 305 aa15.03■□□□□ -0
HPS3-204ENST00000462030 ZNF331Q9NQX6 463 aaPredicted RBP15.03■□□□□ -0
HPS3-204ENST00000462030 RAI1Q7Z5J4 1906 aaPredicted RBP15.02■□□□□ -0
HPS3-204ENST00000462030 TEX50A0A1B0GTY4 177 aa15.02■□□□□ -0
HPS3-204ENST00000462030 IGHG3P01860 377 aa15.02■□□□□ -0
HPS3-204ENST00000462030 CFHR2P36980 270 aa15.02■□□□□ -0
HPS3-204ENST00000462030 DHRS13Q6UX07 377 aa15.02■□□□□ -0
HPS3-204ENST00000462030 FAM167A-AS1Q96KT0 104 aa15.02■□□□□ -0
HPS3-204ENST00000462030 SLC25A2Q9BXI2 301 aa15.02■□□□□ -0
HPS3-204ENST00000462030 CLEC7AQ9BXN2 247 aa15.02■□□□□ -0
HPS3-204ENST00000462030 SPRY3O43610 288 aa15.02□□□□□ -0.01
HPS3-204ENST00000462030 REG1AP05451 166 aa15.02□□□□□ -0.01
HPS3-204ENST00000462030 RNASE2P10153 161 aaKnown RBP15.02□□□□□ -0.01
HPS3-204ENST00000462030 UBE2L3P68036 154 aaKnown RBP15.02□□□□□ -0.01
HPS3-204ENST00000462030 GDF5OSQ5U4N7 250 aa15.02□□□□□ -0.01
HPS3-204ENST00000462030 ITLN1Q8WWA0 313 aa15.02□□□□□ -0.01
HPS3-204ENST00000462030 BORCS7Q96B45 105 aa15.02□□□□□ -0.01
HPS3-204ENST00000462030 ZNF257Q9Y2Q1 563 aa15.02□□□□□ -0.01
HPS3-204ENST00000462030 ASPMQ8IZT6 3477 aa15.02□□□□□ -0.01
HPS3-204ENST00000462030 C2orf83Q53S99 150 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 C19orf35Q6ZS72 473 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 ADTRPQ96IZ2 230 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 ZNF355PQ9NSJ1 428 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 LHBP01229 141 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 CT45A6P0DMU7 189 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 CT45A5P0DMU8 189 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 CT45A7P0DMV0 189 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 TNXAQ16473 311 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 C21orf62-AS1Q17RA5 79 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 SPACA3Q8IXA5 215 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 PNKDQ8N490 385 aa15.01□□□□□ -0.01
HPS3-204ENST00000462030 ICE1Q9Y2F5 2266 aa15□□□□□ -0.01
HPS3-204ENST00000462030 PSMB11A5LHX3 300 aa15□□□□□ -0.01
HPS3-204ENST00000462030 PYYP10082 97 aa15□□□□□ -0.01
HPS3-204ENST00000462030 SSBP2P81877 361 aaPredicted RBP15□□□□□ -0.01
HPS3-204ENST00000462030 OR2T6Q8NHC8 308 aa15□□□□□ -0.01
HPS3-204ENST00000462030 COMMD5Q9GZQ3 224 aa15□□□□□ -0.01
HPS3-204ENST00000462030 MFAP2P55001 183 aa15□□□□□ -0.01
HPS3-204ENST00000462030 CD69Q07108 199 aa15□□□□□ -0.01
HPS3-204ENST00000462030 RTL8BQ17RB0 113 aa15□□□□□ -0.01
HPS3-204ENST00000462030 VHLLQ6RSH7 139 aa15□□□□□ -0.01
HPS3-204ENST00000462030 MBD6Q96DN6 1003 aa15□□□□□ -0.01
HPS3-204ENST00000462030 C19orf24Q9BVV8 132 aa15□□□□□ -0.01
HPS3-204ENST00000462030 ZNF71Q9NQZ8 489 aaPredicted RBP15□□□□□ -0.01
HPS3-204ENST00000462030 MRPL27Q9P0M9 148 aaKnown RBP15□□□□□ -0.01
HPS3-204ENST00000462030 SAA1P0DJI8 122 aaPredicted RBP14.99□□□□□ -0.01
HPS3-204ENST00000462030 CD59P13987 128 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 SELENOVP59797 346 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 PRR31Q5SQ13 230 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 STUMQ69YW2 141 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 Q6ZVH6 145 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 RND1Q92730 232 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 CBY1Q9Y3M2 126 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 ARFGEF3Q5TH69 2177 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 C19orf67A6NJJ6 358 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 BHLHA15Q7RTS1 189 aaPredicted RBP14.99□□□□□ -0.01
HPS3-204ENST00000462030 DEFB108BQ8NET1 73 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 NUP35Q8NFH5 326 aa14.99□□□□□ -0.01
HPS3-204ENST00000462030 SVILO95425 2214 aa14.98□□□□□ -0.01
HPS3-204ENST00000462030 TSPOP30536 169 aa14.98□□□□□ -0.01
HPS3-204ENST00000462030 GPR6P46095 362 aaPredicted RBP14.98□□□□□ -0.01
HPS3-204ENST00000462030 HINT1P49773 126 aaPredicted RBP14.98□□□□□ -0.01
HPS3-204ENST00000462030 KLHDC1Q8N7A1 406 aa14.98□□□□□ -0.01
HPS3-204ENST00000462030 OR1L8Q8NGR8 309 aa14.98□□□□□ -0.01
HPS3-204ENST00000462030 WIPF2Q8TF74 440 aaPredicted RBP14.98□□□□□ -0.01
HPS3-204ENST00000462030 SNRNP40Q96DI7 357 aaKnown RBP14.98□□□□□ -0.01
HPS3-204ENST00000462030 SSBP4Q9BWG4 385 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms