RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 HSPB1P04792 205 aaKnown RBP10.66□□□□□ -0.7
RBM39-222ENST00000461849 PSMB6P28072 239 aa10.66□□□□□ -0.7
RBM39-222ENST00000461849 SLURP1P55000 103 aa10.66□□□□□ -0.7
RBM39-222ENST00000461849 RRAS2P62070 204 aaPredicted RBP10.66□□□□□ -0.7
RBM39-222ENST00000461849 WT1-ASQ06250 92 aa10.66□□□□□ -0.7
RBM39-222ENST00000461849 IL15RAQ13261 267 aa10.66□□□□□ -0.7
RBM39-222ENST00000461849 C11orf87Q6NUJ2 197 aa10.66□□□□□ -0.7
RBM39-222ENST00000461849 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
RBM39-222ENST00000461849 DLX4Q92988 240 aaPredicted RBP10.66□□□□□ -0.7
RBM39-222ENST00000461849 HINT2Q9BX68 163 aa10.66□□□□□ -0.7
RBM39-222ENST00000461849 ENY2Q9NPA8 101 aa10.66□□□□□ -0.7
RBM39-222ENST00000461849 MGAT4CQ9UBM8 478 aa10.66□□□□□ -0.7
RBM39-222ENST00000461849 IGHV4OR15-8A0A075B7B6 117 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 A0A087WW49 117 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 A0A0G2JLM5 398 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 OR13C7P0DN81 318 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 AREGP15514 252 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 CTRB1P17538 263 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 NKX2-1P43699 371 aaPredicted RBP10.65□□□□□ -0.7
RBM39-222ENST00000461849 HOXA1P49639 335 aaPredicted RBP10.65□□□□□ -0.7
RBM39-222ENST00000461849 H2BFSP57053 126 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 FCN2Q15485 313 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 CTRB2Q6GPI1 263 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 OR2C3Q8N628 320 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 OR5T1Q8NG75 326 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 OR10W1Q8NGF6 305 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 OR1L6Q8NGR2 347 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 CIB3Q96Q77 187 aaPredicted RBP10.65□□□□□ -0.7
RBM39-222ENST00000461849 NMES1Q9C002 83 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 RBKSQ9H477 322 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 GSKIPQ9P0R6 139 aa10.65□□□□□ -0.7
RBM39-222ENST00000461849 COL7A1Q02388 2944 aa10.64□□□□□ -0.71
RBM39-222ENST00000461849 CEBPZOSA8MTT3 80 aa10.64□□□□□ -0.71
RBM39-222ENST00000461849 SYNGR2O43760 224 aa10.64□□□□□ -0.71
RBM39-222ENST00000461849 NHLRC4P0CG21 123 aaPredicted RBP10.64□□□□□ -0.71
RBM39-222ENST00000461849 ATP5IP56385 69 aaPredicted RBP10.64□□□□□ -0.71
RBM39-222ENST00000461849 ERHP84090 104 aaKnown RBP10.64□□□□□ -0.71
RBM39-222ENST00000461849 BSXQ3C1V8 233 aa10.64□□□□□ -0.71
RBM39-222ENST00000461849 OR11H7Q8NGC8 314 aa10.64□□□□□ -0.71
RBM39-222ENST00000461849 DTD1Q8TEA8 209 aa10.64□□□□□ -0.71
RBM39-222ENST00000461849 OR4C12Q96R67 309 aa10.64□□□□□ -0.71
RBM39-222ENST00000461849 HIPK2Q9H2X6 1198 aa10.64□□□□□ -0.71
RBM39-222ENST00000461849 RANGRFQ9HD47 186 aaPredicted RBP10.64□□□□□ -0.71
RBM39-222ENST00000461849 LSM4Q9Y4Z0 139 aaKnown RBP10.64□□□□□ -0.71
RBM39-222ENST00000461849 CYB5BO43169 146 aa10.63□□□□□ -0.71
RBM39-222ENST00000461849 SIX6O95475 246 aa10.63□□□□□ -0.71
RBM39-222ENST00000461849 MBPP02686 304 aaPredicted RBP10.63□□□□□ -0.71
RBM39-222ENST00000461849 APELAP0DMC3 54 aa10.63□□□□□ -0.71
RBM39-222ENST00000461849 HIST1H1BP16401 226 aaKnown RBP10.63□□□□□ -0.71
RBM39-222ENST00000461849 CXCL3P19876 107 aa10.63□□□□□ -0.71
RBM39-222ENST00000461849 HTR2BP41595 481 aa10.63□□□□□ -0.71
RBM39-222ENST00000461849 SPINK9Q5DT21 86 aa10.63□□□□□ -0.71
RBM39-222ENST00000461849 OR1P1Q8NH06 330 aa10.63□□□□□ -0.71
RBM39-222ENST00000461849 RAB40CQ96S21 281 aa10.63□□□□□ -0.71
RBM39-222ENST00000461849 ELOVL1Q9BW60 279 aa10.63□□□□□ -0.71
RBM39-222ENST00000461849 HEYLQ9NQ87 328 aaPredicted RBP10.63□□□□□ -0.71
RBM39-222ENST00000461849 F11RQ9Y624 299 aaKnown RBP10.63□□□□□ -0.71
RBM39-222ENST00000461849 TRBV9A0A0B4J1U6 114 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 WRBO00258 174 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 NXPH3O95157 252 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 ZP3P21754 424 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 SNCAP37840 140 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 SUB1P53999 127 aaKnown RBP eCLIP10.62□□□□□ -0.71
RBM39-222ENST00000461849 TAS2R30P59541 319 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 PVRIGQ6DKI7 326 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 ACSM6Q6P461 480 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 ZNF436Q9C0F3 470 aaPredicted RBP10.62□□□□□ -0.71
RBM39-222ENST00000461849 MAGT1Q9H0U3 335 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 RCL1Q9Y2P8 373 aaKnown RBP10.62□□□□□ -0.71
RBM39-222ENST00000461849 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 U3KQ87 197 aa10.62□□□□□ -0.71
RBM39-222ENST00000461849 IGLV11-55A0A075B6I3 123 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 SCGB1D2O95969 90 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 REG1AP05451 166 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 GIPP09681 153 aaPredicted RBP10.61□□□□□ -0.71
RBM39-222ENST00000461849 RNASE2P10153 161 aaKnown RBP10.61□□□□□ -0.71
RBM39-222ENST00000461849 DEFA4P12838 97 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 POLR2GP62487 172 aaKnown RBP eCLIP10.61□□□□□ -0.71
RBM39-222ENST00000461849 C2orf83Q53S99 150 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 NOXA1Q86UR1 476 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 NECAP1Q8NC96 275 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 SMIM8Q96KF7 97 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 WWC2-AS2Q96NR7 200 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 FANCD2OSQ96PS1 177 aa10.61□□□□□ -0.71
RBM39-222ENST00000461849 ANKRD34BA5PLL1 514 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 K7EPK0 472 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 CORTO00230 105 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 SSSCA1O60232 199 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 TSC22D2O75157 780 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 PET100P0DJ07 73 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 GP9P14770 177 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 RAP2BP61225 183 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 RPP30P78346 268 aaKnown RBP10.6□□□□□ -0.71
RBM39-222ENST00000461849 RAB32Q13637 225 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 CHAC2Q8WUX2 184 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 PPP1R1CQ8WVI7 109 aa10.6□□□□□ -0.71
RBM39-222ENST00000461849 USMG5Q96IX5 58 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms