RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 RNASE10Q5GAN6 216 aaKnown RBP6.82□□□□□ -1.32
BRCA1-207ENST00000461798 GPR107Q5VW38 600 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 TMEM229BQ8NBD8 167 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 TERB2Q8NHR7 220 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 MRGPRFQ96AM1 343 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 OR10C1Q96KK4 312 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 EXTL2Q9UBQ6 330 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 SMPXQ9UHP9 88 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 SELENOKQ9Y6D0 94 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 SACSQ9NZJ4 4579 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 A0A0B4J293 547 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 NUPL2O15504 423 aaKnown RBP6.81□□□□□ -1.32
BRCA1-207ENST00000461798 B3GALNT1O75752 331 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 ATG12O94817 140 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 PIGPP57054 158 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 MRPS10P82664 201 aaKnown RBP6.81□□□□□ -1.32
BRCA1-207ENST00000461798 ERHP84090 104 aaKnown RBP6.81□□□□□ -1.32
BRCA1-207ENST00000461798 SSBP1Q04837 148 aaKnown RBP6.81□□□□□ -1.32
BRCA1-207ENST00000461798 RELQ04864 619 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-207ENST00000461798 Q56UQ5 140 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 Q6ZWC4 215 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 WFDC3Q8IUB2 231 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 ZFAND1Q8TCF1 268 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 OVOL2Q9BRP0 275 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 NXF2Q9GZY0 626 aaKnown RBP6.81□□□□□ -1.32
BRCA1-207ENST00000461798 MIXL1Q9H2W2 232 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 TP53TG1Q9Y2A0 90 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 DNAH1Q9P2D7 4330 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 CSMD3Q7Z407 3707 aa6.81□□□□□ -1.32
BRCA1-207ENST00000461798 KIR2DL5BA0A0G2JN68 375 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 KIR2DL5BA0A0G2JPC4 375 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 IGHV7-4-1A0A0J9YVY3 117 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 C3orf85A0A1B0GTC6 90 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 OR4C46A6NHA9 309 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 GABARAPH6UMI1 98 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 UBE2CO00762 179 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 CHEK1O14757 476 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 MT-CO2P00403 227 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 CTSDP07339 412 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-207ENST00000461798 PGAM2P15259 253 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 PI3P19957 117 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 UCP1P25874 307 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 CMC4P56277 68 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-207ENST00000461798 TAS2R19P59542 299 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 ODF3L2Q3SX64 289 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 AARDQ4LEZ3 155 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 KIR2DL5AQ8N109 375 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 UBAC2Q8NBM4 344 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 KIR2DL5BQ8NHK3 375 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 MISP3Q96FF7 219 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 TP53RKQ96S44 253 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 C20orf24Q9BUV8 137 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 RHPN1-AS1Q9BWJ2 59 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 MRPS26Q9BYN8 205 aaKnown RBP6.8□□□□□ -1.32
BRCA1-207ENST00000461798 RABL2AQ9UBK7 228 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-207ENST00000461798 RABL2BQ9UNT1 228 aa6.8□□□□□ -1.32
BRCA1-207ENST00000461798 RYR2Q92736 4967 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 TRAV14DV4A0A0A6YYC5 116 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 CTDSP2O14595 271 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 CTDSPLO15194 276 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 CDS2O95674 445 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 RAB3DO95716 219 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 CD5P06127 495 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 RPL5P46777 297 aaKnown RBP6.79□□□□□ -1.32
BRCA1-207ENST00000461798 NPBWR1P48145 328 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 APOC4P55056 127 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 SURF2Q15527 256 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-207ENST00000461798 IZUMO4Q1ZYL8 232 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 FAM90A2PQ658T7 463 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 STEAP1BQ6NZ63 245 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 GPR141Q7Z602 305 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 CCDC71LQ8N9Z2 235 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 TMEM116Q8NCL8 245 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 DUSP18Q8NEJ0 188 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 OR4D10Q8NGI6 311 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 OR13C8Q8NGS7 320 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 RNF2Q99496 336 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 COPZ2Q9P299 210 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 STARD9Q9P2P6 4700 aa6.79□□□□□ -1.32
BRCA1-207ENST00000461798 IGHV3OR16-8A0A075B7F1 116 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 ST8SIA3O43173 380 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 ZNF207O43670 478 aaKnown RBP6.78□□□□□ -1.32
BRCA1-207ENST00000461798 GNG7O60262 68 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 YIF1AO95070 293 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 TMEM50AO95807 157 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 RNASE2P10153 161 aaKnown RBP6.78□□□□□ -1.32
BRCA1-207ENST00000461798 ATF4P18848 351 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-207ENST00000461798 SNCAP37840 140 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 ETV6P41212 452 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 SUB1P53999 127 aaKnown RBP eCLIP6.78□□□□□ -1.32
BRCA1-207ENST00000461798 MEF2DQ14814 521 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 SPCS2Q15005 226 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 BSXQ3C1V8 233 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 SP6Q3SY56 376 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 RNASE12Q5GAN4 147 aaKnown RBP6.78□□□□□ -1.32
BRCA1-207ENST00000461798 TOMM20LQ6UXN7 152 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 Q6ZRM9 215 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 FAM219AQ8IW50 185 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 OR52E5Q8NH55 327 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 MARCH1Q8TCQ1 289 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms